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The map label for this gene is CitT [H]

Identifier: 20094822

GI number: 20094822

Start: 1412760

End: 1413503

Strand: Reverse

Name: CitT [H]

Synonym: MK1386

Alternate gene names: 20094822

Gene position: 1413503-1412760 (Counterclockwise)

Preceding gene: 20094826

Following gene: 20094820

Centisome position: 83.39

GC content: 66.8

Gene sequence:

>744_bases
ATGCTGCCCTCATCACCGTCCTGTCGCTGCTGGCTCCGGGCGCCCCGCCGACCCCATCGCGTGGTCCTCCCGGCTTTGGT
TTCAGCCAACTCGGTCGGCGCCCTGACGCCGCTCGGGAACCCGCAGAATGCCATCATCTACTCGCACTACCGCGTGGATC
CTGTGGACTTCTTCGTCACGCAGCTGCCGGTATGCGCGGCGCTCCTGGCGCCCGGTCTTCTATACGCGTGGGTTCGCGGT
GAGCGGGTCGAGTCGGGCTCCGGGTCGGCTCCGAACGTCCTGGACGTGGCGGTGGTGATCGCGGCGGCCGGTTGTCTGCT
GGCTCACGTCCCGGTGTACTTCTGGTTCCCCGCGGTCTTCGGCTACTACGCCGTTCTCCGCCCGCACGCCGTCCGAGAAG
TGGACTGGGTCGTGATCGGCCTGCTGACGGTCGGAGTATTGGTTCCGAGCGTGATCGGGTCGTTGGGTTGGAACCCGCGG
GTGGACGACCCGTTCGTGTGGTCCGTGTTGCTGTCCCAGGTCGTGAGCAACGTGCCGACTACCGTGTTAGTGGTGCCCAT
GACGGACGACTGGAGGGATCTGCTCCACGGTGTAACGGTCGGCGGCTACGGGACGCCGGTGGCCTCCGTGGCCAACCTGA
TAGCGTTGAGGGCCGCGGGGAGCCGCGGTGTTCTCCGCGACTATGCCGTGCTGCAGGGCTCATGCCTGATGTTGGGGGTC
CTGTCGCACTACGCGCTGAGCTGA

Upstream 100 bases:

>100_bases
GGGGCGATTCACCGGGTTAGAAGGGCGGTACTCGGGAAGAGAGCGGGCACCGTACGTGTGATGCTAGTGACCGGGCTGCT
GTCCATGTTCCTCACGAACG

Downstream 100 bases:

>100_bases
CGTATGGCCTCCCCGAGGTCGGACGGCACGATCTCGCGCCGCCCTAGCACCCGGGCGTGGGCTTCCTCCTCGACGACGAC
GTAATCGTACCCCAGCTCCC

Product: di- and tricarboxylate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLPSSPSCRCWLRAPRRPHRVVLPALVSANSVGALTPLGNPQNAIIYSHYRVDPVDFFVTQLPVCAALLAPGLLYAWVRG
ERVESGSGSAPNVLDVAVVIAAAGCLLAHVPVYFWFPAVFGYYAVLRPHAVREVDWVVIGLLTVGVLVPSVIGSLGWNPR
VDDPFVWSVLLSQVVSNVPTTVLVVPMTDDWRDLLHGVTVGGYGTPVASVANLIALRAAGSRGVLRDYAVLQGSCLMLGV
LSHYALS

Sequences:

>Translated_247_residues
MLPSSPSCRCWLRAPRRPHRVVLPALVSANSVGALTPLGNPQNAIIYSHYRVDPVDFFVTQLPVCAALLAPGLLYAWVRG
ERVESGSGSAPNVLDVAVVIAAAGCLLAHVPVYFWFPAVFGYYAVLRPHAVREVDWVVIGLLTVGVLVPSVIGSLGWNPR
VDDPFVWSVLLSQVVSNVPTTVLVVPMTDDWRDLLHGVTVGGYGTPVASVANLIALRAAGSRGVLRDYAVLQGSCLMLGV
LSHYALS
>Mature_247_residues
MLPSSPSCRCWLRAPRRPHRVVLPALVSANSVGALTPLGNPQNAIIYSHYRVDPVDFFVTQLPVCAALLAPGLLYAWVRG
ERVESGSGSAPNVLDVAVVIAAAGCLLAHVPVYFWFPAVFGYYAVLRPHAVREVDWVVIGLLTVGVLVPSVIGSLGWNPR
VDDPFVWSVLLSQVVSNVPTTVLVVPMTDDWRDLLHGVTVGGYGTPVASVANLIALRAAGSRGVLRDYAVLQGSCLMLGV
LSHYALS

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Escherichia coli, GI1787039, Length=245, Percent_Identity=26.1224489795918, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 26385; Mature: 26385

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSSPSCRCWLRAPRRPHRVVLPALVSANSVGALTPLGNPQNAIIYSHYRVDPVDFFVT
CCCCCCCCEEEECCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHH
QLPVCAALLAPGLLYAWVRGERVESGSGSAPNVLDVAVVIAAAGCLLAHVPVYFWFPAVF
HHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYYAVLRPHAVREVDWVVIGLLTVGVLVPSVIGSLGWNPRVDDPFVWSVLLSQVVSNVPT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
TVLVVPMTDDWRDLLHGVTVGGYGTPVASVANLIALRAAGSRGVLRDYAVLQGSCLMLGV
EEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHH
LSHYALS
HHHHHCC
>Mature Secondary Structure
MLPSSPSCRCWLRAPRRPHRVVLPALVSANSVGALTPLGNPQNAIIYSHYRVDPVDFFVT
CCCCCCCCEEEECCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHH
QLPVCAALLAPGLLYAWVRGERVESGSGSAPNVLDVAVVIAAAGCLLAHVPVYFWFPAVF
HHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYYAVLRPHAVREVDWVVIGLLTVGVLVPSVIGSLGWNPRVDDPFVWSVLLSQVVSNVPT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
TVLVVPMTDDWRDLLHGVTVGGYGTPVASVANLIALRAAGSRGVLRDYAVLQGSCLMLGV
EEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHH
LSHYALS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]