Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094820

Identifier: 20094820

GI number: 20094820

Start: 1411404

End: 1411694

Strand: Reverse

Name: 20094820

Synonym: MK1384

Alternate gene names: NA

Gene position: 1411694-1411404 (Counterclockwise)

Preceding gene: 20094822

Following gene: 20094819

Centisome position: 83.29

GC content: 58.42

Gene sequence:

>291_bases
ATGGCTAAGATCCGGAGGTTGGTACTGGACGTTATGAAGCCGATGGAACCCGATACCACGGAGCTGGCGCGCTCGCTGGC
GAAGCTGGAGGGAGTCGACGGCGTCAACATAGTCCTGGTCGAGGTGGACCGCGACGTCGAGAACGTGAAGGTCACGGTAG
AGGGACCGGATCTTGACTTCGAGCGGATAAAGGACCTGATCGAGGACATGGGAGGCGCCATCCACAGCATAGACGAGGTG
GTAGCCGGATCTCGGATCGTCGAGGAGGTAAAGACACCACAAGACGACTAA

Upstream 100 bases:

>100_bases
CGCGAGAAGATCCCGAAGCGTGTACATGGCTGCCGGGATGGGTCCAGGTCGTGGGTGCCACGTGCTCAAACTCCATCACC
CTCTCCGAAGGGGGTCTCCC

Downstream 100 bases:

>100_bases
GGGTTAGTGTCACCGTTGAACCGGAAGGAGCTGCTGAGGAGGGTGCTTAAGGAGGCTCTGGCGACCGGGCGCTACATGGC
GTTGGGATCCATGGACGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAKIRRLVLDVMKPMEPDTTELARSLAKLEGVDGVNIVLVEVDRDVENVKVTVEGPDLDFERIKDLIEDMGGAIHSIDEV
VAGSRIVEEVKTPQDD

Sequences:

>Translated_96_residues
MAKIRRLVLDVMKPMEPDTTELARSLAKLEGVDGVNIVLVEVDRDVENVKVTVEGPDLDFERIKDLIEDMGGAIHSIDEV
VAGSRIVEEVKTPQDD
>Mature_95_residues
AKIRRLVLDVMKPMEPDTTELARSLAKLEGVDGVNIVLVEVDRDVENVKVTVEGPDLDFERIKDLIEDMGGAIHSIDEVV
AGSRIVEEVKTPQDD

Specific function: Unknown

COG id: COG1888

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003831
- InterPro:   IPR023129
- ProDom:   PD012512 [H]

Pfam domain/function: PF02680 DUF211 [H]

EC number: NA

Molecular weight: Translated: 10627; Mature: 10496

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIRRLVLDVMKPMEPDTTELARSLAKLEGVDGVNIVLVEVDRDVENVKVTVEGPDLDF
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCH
ERIKDLIEDMGGAIHSIDEVVAGSRIVEEVKTPQDD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKIRRLVLDVMKPMEPDTTELARSLAKLEGVDGVNIVLVEVDRDVENVKVTVEGPDLDF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCH
ERIKDLIEDMGGAIHSIDEVVAGSRIVEEVKTPQDD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]