| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094794
Identifier: 20094794
GI number: 20094794
Start: 1381069
End: 1381686
Strand: Direct
Name: 20094794
Synonym: MK1358
Alternate gene names: NA
Gene position: 1381069-1381686 (Clockwise)
Preceding gene: 20094793
Following gene: 20094796
Centisome position: 81.48
GC content: 73.95
Gene sequence:
>618_bases GTGCACCACACCGCGTCCGAGATGCTGGCGGTAGGCGCCGCGCTGGGCGTGAGCGGCGGGCTGGCCCCGGGTCCGCTGCA GGCGCTCATCGTGGCGGAGACGCTCGGGAACGGCCTGCGGGCCGGGCTGGCGGTGGCCGTGGTCCCCGTGATCACGGACG GTCCGCTGGTCACGGCCGCGGGGTTGGCGGCCGCGCGGCTCCCCGGCTGGGTCCTCCGGTACCTCGGACTCGCGGGGTCC GCCGTCCTGGCCTACATGGGGCTGTCGCTGATCAGGGAGGCGGACTCGGCCGAACCCGCGCGGTCGGAGGGCGCCGGGTC CTCGCTGCGGCGCGCCGTGGTCGTCAACCTGCTGAACCCACACCCCTACGTGTTCTGGCTCACCGTGGGGAGCTCGATGA TGGGTTCGGCACGCTCGCTCCCGGAGATGGTGGCGTTCCCCGTGGGCTTCTTCCTCGGGATCGTGAGCACCCAGGCCGGG ATAGCGGTGGCCGTTCACCGCGCGCTCTCGCTGACGCCCGCCGAGCGGGTGGGCGGGGCGAGGCGGTTGTCCGGGGTCCT GCTACTCGGGGCGGCCGCCTACCTGGCCTACGTCTCGCTGCGTGACATGCCCTCCTGA
Upstream 100 bases:
>100_bases CACCGAGGCGGACAACGTTTAGCGCTCCCGCGAGGCCCCCGGTCCCTCACACCGATCGCGGATGGTAACCGCACGGAACG CCCGAGGAGGGGAGTGTCCC
Downstream 100 bases:
>100_bases GCGATGACGCTCGCCCTCTACCCCCGGCGGCTCCCGTCCGGCCTCGAGCTGTACTCGATCGGACCTCATTCGACGCGGCA CCGACCGTGTGAGGGGAACG
Product: putative component of a threonine efflux system
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA; LysE Type Translocator; Amino Acid Transporter LysE; Lysine Exporter LysE/YggA; Component Of A Threonine Efflux System
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MHHTASEMLAVGAALGVSGGLAPGPLQALIVAETLGNGLRAGLAVAVVPVITDGPLVTAAGLAAARLPGWVLRYLGLAGS AVLAYMGLSLIREADSAEPARSEGAGSSLRRAVVVNLLNPHPYVFWLTVGSSMMGSARSLPEMVAFPVGFFLGIVSTQAG IAVAVHRALSLTPAERVGGARRLSGVLLLGAAAYLAYVSLRDMPS
Sequences:
>Translated_205_residues MHHTASEMLAVGAALGVSGGLAPGPLQALIVAETLGNGLRAGLAVAVVPVITDGPLVTAAGLAAARLPGWVLRYLGLAGS AVLAYMGLSLIREADSAEPARSEGAGSSLRRAVVVNLLNPHPYVFWLTVGSSMMGSARSLPEMVAFPVGFFLGIVSTQAG IAVAVHRALSLTPAERVGGARRLSGVLLLGAAAYLAYVSLRDMPS >Mature_205_residues MHHTASEMLAVGAALGVSGGLAPGPLQALIVAETLGNGLRAGLAVAVVPVITDGPLVTAAGLAAARLPGWVLRYLGLAGS AVLAYMGLSLIREADSAEPARSEGAGSSLRRAVVVNLLNPHPYVFWLTVGSSMMGSARSLPEMVAFPVGFFLGIVSTQAG IAVAVHRALSLTPAERVGGARRLSGVLLLGAAAYLAYVSLRDMPS
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20762; Mature: 20762
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHTASEMLAVGAALGVSGGLAPGPLQALIVAETLGNGLRAGLAVAVVPVITDGPLVTAA CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCHHHHH GLAAARLPGWVLRYLGLAGSAVLAYMGLSLIREADSAEPARSEGAGSSLRRAVVVNLLNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC HPYVFWLTVGSSMMGSARSLPEMVAFPVGFFLGIVSTQAGIAVAVHRALSLTPAERVGGA CCEEEEEEECCHHHCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCH RRLSGVLLLGAAAYLAYVSLRDMPS HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHHTASEMLAVGAALGVSGGLAPGPLQALIVAETLGNGLRAGLAVAVVPVITDGPLVTAA CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCHHHHH GLAAARLPGWVLRYLGLAGSAVLAYMGLSLIREADSAEPARSEGAGSSLRRAVVVNLLNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC HPYVFWLTVGSSMMGSARSLPEMVAFPVGFFLGIVSTQAGIAVAVHRALSLTPAERVGGA CCEEEEEEECCHHHCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCH RRLSGVLLLGAAAYLAYVSLRDMPS HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA