Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094793

Identifier: 20094793

GI number: 20094793

Start: 1380143

End: 1380862

Strand: Direct

Name: 20094793

Synonym: MK1357

Alternate gene names: NA

Gene position: 1380143-1380862 (Clockwise)

Preceding gene: 20094792

Following gene: 20094794

Centisome position: 81.43

GC content: 67.22

Gene sequence:

>720_bases
GTGATTGCTGGAGGCCCTGGTTCTGGCCGCGTTGTCCGTGCCGGGGGACCCGGGAGAGGTCCTCGAGCGGGTCGTCGAGC
ACCCCGAGGTCCTCCTGGCCAAGGGAGGGGCGGTGGAGGTCGCGGCGGTGGAGGGGGCAGGGGTGGCGCCGGTGCCAAGC
TCTCCCGGGCCGGTAAGGTCCTGAGGTCCCCGGGGAAGTTCCTCCGGGCGCTCAAGAAGTTCAAGGTCCGAAAGCGTTAC
TCGAAGCGGGAACGCAAACGACTGCTGCTCCTCTACTGGAAGGTCCGGCTTTACTACCGGACGGTCGCCGAAGGCGTGCT
ACTGTACGCCTCCTTCGCGCTCGCGATCGTGATCTTCGCCCTGGACTTCCTGACGGACGACCTGGAGCTGCTCAGGGAAA
CCTGGTTCGAGAGGAGCCTCTACCTGACCTCCGGCGGCGCCTTTCTCGCTATCTTCGGCGAGATGGTAGTGGCAAACAGG
GCCGTTTCGGCGTTCTCGGAGGCCGTGCTCAGAGGCGGGGGCCTCCCGGCGGCGCTCGGCGCCTTCCGGGCGTGGGCGGT
CTACGGGATGGGGATGCTGTTAGCGATGTACGTCGCGCTCGTCCCCCTGATTATCGCGCTCACCCGGAAGGAACCCGACG
TCAGGACCCTCCCGATGCTGGCGGTCCCGTTGGCCACGGGGATCTGGGCGCTGTGGTGGGGCCTGTGGGTGGTGAGTTGA

Upstream 100 bases:

>100_bases
GGCGTCCACGCCCGGCGATCACTTCCCCGGGATGGGGAGAGTTATGTTTCCGAAAGCGTACCGGCATGGCCCTCACCCGC
GGCCCTCCTACGGGGGCCGT

Downstream 100 bases:

>100_bases
GGGTGATCCGGTCCCGTGCCGGCGGTCTCCGCACCCGCCCGAAGGTCGAACCCGGGAGTTCGATCCGGCGGTACCCGCGG
GGGGTGTCAACGGGGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIAGGPGSGRVVRAGGPGRGPRAGRRAPRGPPGQGRGGGGRGGGGGRGGAGAKLSRAGKVLRSPGKFLRALKKFKVRKRY
SKRERKRLLLLYWKVRLYYRTVAEGVLLYASFALAIVIFALDFLTDDLELLRETWFERSLYLTSGGAFLAIFGEMVVANR
AVSAFSEAVLRGGGLPAALGAFRAWAVYGMGMLLAMYVALVPLIIALTRKEPDVRTLPMLAVPLATGIWALWWGLWVVS

Sequences:

>Translated_239_residues
MIAGGPGSGRVVRAGGPGRGPRAGRRAPRGPPGQGRGGGGRGGGGGRGGAGAKLSRAGKVLRSPGKFLRALKKFKVRKRY
SKRERKRLLLLYWKVRLYYRTVAEGVLLYASFALAIVIFALDFLTDDLELLRETWFERSLYLTSGGAFLAIFGEMVVANR
AVSAFSEAVLRGGGLPAALGAFRAWAVYGMGMLLAMYVALVPLIIALTRKEPDVRTLPMLAVPLATGIWALWWGLWVVS
>Mature_239_residues
MIAGGPGSGRVVRAGGPGRGPRAGRRAPRGPPGQGRGGGGRGGGGGRGGAGAKLSRAGKVLRSPGKFLRALKKFKVRKRY
SKRERKRLLLLYWKVRLYYRTVAEGVLLYASFALAIVIFALDFLTDDLELLRETWFERSLYLTSGGAFLAIFGEMVVANR
AVSAFSEAVLRGGGLPAALGAFRAWAVYGMGMLLAMYVALVPLIIALTRKEPDVRTLPMLAVPLATGIWALWWGLWVVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25703; Mature: 25703

Theoretical pI: Translated: 12.02; Mature: 12.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGGPGSGRVVRAGGPGRGPRAGRRAPRGPPGQGRGGGGRGGGGGRGGAGAKLSRAGKV
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRSPGKFLRALKKFKVRKRYSKRERKRLLLLYWKVRLYYRTVAEGVLLYASFALAIVIFA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDFLTDDLELLRETWFERSLYLTSGGAFLAIFGEMVVANRAVSAFSEAVLRGGGLPAALG
HHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFRAWAVYGMGMLLAMYVALVPLIIALTRKEPDVRTLPMLAVPLATGIWALWWGLWVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAGGPGSGRVVRAGGPGRGPRAGRRAPRGPPGQGRGGGGRGGGGGRGGAGAKLSRAGKV
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRSPGKFLRALKKFKVRKRYSKRERKRLLLLYWKVRLYYRTVAEGVLLYASFALAIVIFA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDFLTDDLELLRETWFERSLYLTSGGAFLAIFGEMVVANRAVSAFSEAVLRGGGLPAALG
HHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFRAWAVYGMGMLLAMYVALVPLIIALTRKEPDVRTLPMLAVPLATGIWALWWGLWVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA