| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094786
Identifier: 20094786
GI number: 20094786
Start: 1370729
End: 1371478
Strand: Reverse
Name: 20094786
Synonym: MK1350
Alternate gene names: NA
Gene position: 1371478-1370729 (Counterclockwise)
Preceding gene: 20094787
Following gene: 20094785
Centisome position: 80.91
GC content: 57.07
Gene sequence:
>750_bases GTGACGAGGAACAGTGAGGTCGTGGATTGGCTCCACTCGTCGAACGGACCCACCTGGCCGCTGAGCAACTGGGTCAAAGC CGTCAAGTACATCGTCTACGTAGCTCCGGAGCGTAAGGAGGATCCAACACCGCTGAAGGTAGTTCAGGTGGCCGAGTCGC CAAATACTCTCGACTGTTCCACGAAAGATGTTCCCTACTGGGGTGAAGTGACGTGGGGTAAAGTCAGCGAGAGGGATTTC GCAAACGCTGTACAGGCAATGAACGGGGGTACGCTCGAATCCCAACTGTTCAAGGCCGCGGTGAGAATCGCCTACTGGGT GGCTAGTAAGATCCCCGCGAGGGACTACAGCACGCCGGGCGACATGGATTGGACAGAGTTCACACCGTTGCAGGTGTTGA AGGAATACTGGCGTGGGTGGAACTGTGCTGGGCACGCTGTCCTGGCAGTAGCTCTGATGAGGGCGGCGATGATACCGGCG AAAGTCGTAGGTGGGCTATTGGCGGGCGAAGGACATGCTTGGGTTGCGTTCTATAACCAAGACTTCAGGTGGGTGCACGT GGATCCCACCGGCGACGCGGGCAACAGCTACATGCAACTCTATCTAGCGCCTCGCGTCATTACCGACGACGACGTCGAGG CGCACTCAGGATACTATTGTGACGACAACGCTACCACGATAGACGACATCGAGAGGGAGTGGATACCGGTAGCACCGATC GTGGTTGTCGCCGCACTAATGATATACTGA
Upstream 100 bases:
>100_bases TAGTGGCGATCACGGGAGCGGCTTGTGGCGACCTACCCCCATGGGCCGGTTGGGTCGCCAACCAACCTGATTACATCAAG AAGATTACATCAAGAAGTAC
Downstream 100 bases:
>100_bases TGCTAGCGGCAAGAAGAGGGGGTATCAGCGCCTGAACGCAGGCCCATCGCCCATTTTTACCCTCCTCATGTTTCTCATTA TGTTTCTCATTCCGCTCAGT
Product: transglutaminase-like supefamily cysteine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTRNSEVVDWLHSSNGPTWPLSNWVKAVKYIVYVAPERKEDPTPLKVVQVAESPNTLDCSTKDVPYWGEVTWGKVSERDF ANAVQAMNGGTLESQLFKAAVRIAYWVASKIPARDYSTPGDMDWTEFTPLQVLKEYWRGWNCAGHAVLAVALMRAAMIPA KVVGGLLAGEGHAWVAFYNQDFRWVHVDPTGDAGNSYMQLYLAPRVITDDDVEAHSGYYCDDNATTIDDIEREWIPVAPI VVVAALMIY
Sequences:
>Translated_249_residues MTRNSEVVDWLHSSNGPTWPLSNWVKAVKYIVYVAPERKEDPTPLKVVQVAESPNTLDCSTKDVPYWGEVTWGKVSERDF ANAVQAMNGGTLESQLFKAAVRIAYWVASKIPARDYSTPGDMDWTEFTPLQVLKEYWRGWNCAGHAVLAVALMRAAMIPA KVVGGLLAGEGHAWVAFYNQDFRWVHVDPTGDAGNSYMQLYLAPRVITDDDVEAHSGYYCDDNATTIDDIEREWIPVAPI VVVAALMIY >Mature_248_residues TRNSEVVDWLHSSNGPTWPLSNWVKAVKYIVYVAPERKEDPTPLKVVQVAESPNTLDCSTKDVPYWGEVTWGKVSERDFA NAVQAMNGGTLESQLFKAAVRIAYWVASKIPARDYSTPGDMDWTEFTPLQVLKEYWRGWNCAGHAVLAVALMRAAMIPAK VVGGLLAGEGHAWVAFYNQDFRWVHVDPTGDAGNSYMQLYLAPRVITDDDVEAHSGYYCDDNATTIDDIEREWIPVAPIV VVAALMIY
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27831; Mature: 27699
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNSEVVDWLHSSNGPTWPLSNWVKAVKYIVYVAPERKEDPTPLKVVQVAESPNTLDCS CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCCC TKDVPYWGEVTWGKVSERDFANAVQAMNGGTLESQLFKAAVRIAYWVASKIPARDYSTPG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DMDWTEFTPLQVLKEYWRGWNCAGHAVLAVALMRAAMIPAKVVGGLLAGEGHAWVAFYNQ CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DFRWVHVDPTGDAGNSYMQLYLAPRVITDDDVEAHSGYYCDDNATTIDDIEREWIPVAPI CEEEEEECCCCCCCCCEEEEEEECEEECCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHH VVVAALMIY HHHHHHHHC >Mature Secondary Structure TRNSEVVDWLHSSNGPTWPLSNWVKAVKYIVYVAPERKEDPTPLKVVQVAESPNTLDCS CCCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCCCCCC TKDVPYWGEVTWGKVSERDFANAVQAMNGGTLESQLFKAAVRIAYWVASKIPARDYSTPG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DMDWTEFTPLQVLKEYWRGWNCAGHAVLAVALMRAAMIPAKVVGGLLAGEGHAWVAFYNQ CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DFRWVHVDPTGDAGNSYMQLYLAPRVITDDDVEAHSGYYCDDNATTIDDIEREWIPVAPI CEEEEEECCCCCCCCCEEEEEEECEEECCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHH VVVAALMIY HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA