| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094785
Identifier: 20094785
GI number: 20094785
Start: 1369858
End: 1370589
Strand: Reverse
Name: 20094785
Synonym: MK1349
Alternate gene names: NA
Gene position: 1370589-1369858 (Counterclockwise)
Preceding gene: 20094786
Following gene: 20094784
Centisome position: 80.86
GC content: 61.89
Gene sequence:
>732_bases GTGGCCGACTACCTCGAAGCGCTCTCCTGTCTGAAGTCCCACGACCTGGACCGATGTCGCCTCGTCGCCGACGACCTTCC CATTCACTATCTCACCTTGATCCCGAGTGCTGACCTCCTCACCGATAACCGCCCTCAAACGTTCCTCGAGAGGAACGAGC TGAGGGTCCAAACGTCGTTCGGCGAGTTCCACGTCGGCCTCCGAACCCCCGCCGTGGTCTCCGGTTGCCTGGAAAACGTC CTCCTGCGGCTCGGCGCCCCGGCCCCGGTGACGCTCCTGCGCGACGGTACGGCGGCGTTCGTGAGTCCGATCGGAGTGAT CTTCGCGAGGCTGGACGGGAGAGTAGTTCCCGAGGCGGAGATTCGGTACGAAAAGTATTGGAGAAGTGCTTCGAACTTCT TCCGCGCGCCTTCGGCTGACTACTACGAGTACCGGTTTGACGCCCGCAGAGGCGTTGCGGAAGTCAGGTTTTACGACTTA GAACGTCGGATCGCGGTCACCGTTTCGTTGAACTTCAACGGTAAGAGCGCGACGTTCAGCGAGAGTGCGATAGATGAGAC GACGCTGAGAGAGCTGAGGTCCCGGTTGAAACGCGTCTCTGAGGTTCAGGACGCCGTGCTGGTCAGGACACCGGACGGGA CCGAGGTCGTATGGGTCGAGTTCGGCGTGCCCGGACCCCCTCCGGGGCTCACGTCTCGCGACGGCACTGAAGATCCTCAA CACCATGCGTGA
Upstream 100 bases:
>100_bases AGGCCCATCGCCCATTTTTACCCTCCTCATGTTTCTCATTATGTTTCTCATTCCGCTCAGTCCAGCATTCGCGCTTGACG ACGTTATTGAAGGTAATACG
Downstream 100 bases:
>100_bases GATCACCGACAGTCCCCTCGCGTTCATTCCCGCGTTGTTGGGTCCCGTAGCCGGACTGTACGTGACGATCAACGGTCTGA GCGTCGAGATCAGGTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MADYLEALSCLKSHDLDRCRLVADDLPIHYLTLIPSADLLTDNRPQTFLERNELRVQTSFGEFHVGLRTPAVVSGCLENV LLRLGAPAPVTLLRDGTAAFVSPIGVIFARLDGRVVPEAEIRYEKYWRSASNFFRAPSADYYEYRFDARRGVAEVRFYDL ERRIAVTVSLNFNGKSATFSESAIDETTLRELRSRLKRVSEVQDAVLVRTPDGTEVVWVEFGVPGPPPGLTSRDGTEDPQ HHA
Sequences:
>Translated_243_residues MADYLEALSCLKSHDLDRCRLVADDLPIHYLTLIPSADLLTDNRPQTFLERNELRVQTSFGEFHVGLRTPAVVSGCLENV LLRLGAPAPVTLLRDGTAAFVSPIGVIFARLDGRVVPEAEIRYEKYWRSASNFFRAPSADYYEYRFDARRGVAEVRFYDL ERRIAVTVSLNFNGKSATFSESAIDETTLRELRSRLKRVSEVQDAVLVRTPDGTEVVWVEFGVPGPPPGLTSRDGTEDPQ HHA >Mature_242_residues ADYLEALSCLKSHDLDRCRLVADDLPIHYLTLIPSADLLTDNRPQTFLERNELRVQTSFGEFHVGLRTPAVVSGCLENVL LRLGAPAPVTLLRDGTAAFVSPIGVIFARLDGRVVPEAEIRYEKYWRSASNFFRAPSADYYEYRFDARRGVAEVRFYDLE RRIAVTVSLNFNGKSATFSESAIDETTLRELRSRLKRVSEVQDAVLVRTPDGTEVVWVEFGVPGPPPGLTSRDGTEDPQH HA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27269; Mature: 27138
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYLEALSCLKSHDLDRCRLVADDLPIHYLTLIPSADLLTDNRPQTFLERNELRVQTSF CHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCHHCCCCCCHHHHHCCCEEEEECC GEFHVGLRTPAVVSGCLENVLLRLGAPAPVTLLRDGTAAFVSPIGVIFARLDGRVVPEAE CEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHH IRYEKYWRSASNFFRAPSADYYEYRFDARRGVAEVRFYDLERRIAVTVSLNFNGKSATFS HHHHHHHHHHHHHHCCCCCCHHEEEEHHHCCHHHHEEEECCEEEEEEEEEEECCCCCCCC ESAIDETTLRELRSRLKRVSEVQDAVLVRTPDGTEVVWVEFGVPGPPPGLTSRDGTEDPQ HHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HHA CCC >Mature Secondary Structure ADYLEALSCLKSHDLDRCRLVADDLPIHYLTLIPSADLLTDNRPQTFLERNELRVQTSF HHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCHHCCCCCCHHHHHCCCEEEEECC GEFHVGLRTPAVVSGCLENVLLRLGAPAPVTLLRDGTAAFVSPIGVIFARLDGRVVPEAE CEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHH IRYEKYWRSASNFFRAPSADYYEYRFDARRGVAEVRFYDLERRIAVTVSLNFNGKSATFS HHHHHHHHHHHHHHCCCCCCHHEEEEHHHCCHHHHEEEECCEEEEEEEEEEECCCCCCCC ESAIDETTLRELRSRLKRVSEVQDAVLVRTPDGTEVVWVEFGVPGPPPGLTSRDGTEDPQ HHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HHA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA