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The map label for this gene is ybgI [C]

Identifier: 20094628

GI number: 20094628

Start: 1186783

End: 1187529

Strand: Direct

Name: ybgI [C]

Synonym: MK1192

Alternate gene names: 20094628

Gene position: 1186783-1187529 (Clockwise)

Preceding gene: 20094627

Following gene: 20094629

Centisome position: 70.02

GC content: 68.81

Gene sequence:

>747_bases
TTGGCGATGGTACGTGAGGTGATCGATTTCGTGGAAGAGCTGGCCCCACCGGACCTGGCCGAGGACTGGGACAATCCCGG
GATCCAAGTCTGTCCTCCCGGCGGCCTGGACAGGAAGGCGGAGCGCGTTCTGGTCGCCCTGGACGCCACCCACGCGCTCG
AGCGAGCCGGGGACGCGGATCTGGTGCTAACCCACCACCCGCTCCTGTTCCGACCCCCTAGGAGGATCGGCGGCCGCTGG
TACCGGGTGCTCCGGGCGGTCTTGGAGGCGGACGCCGTGTTCTACGCGGCCCACACCAACCTGGACCGGGCCGAGGGTGG
CGTGGCCGATACGCTCGCCCGCCGTTTGAACCTGCGCGTCGAGCGCGAGGCGTGCGACGGGTTCGGGCGTCTGTGCGAGG
TGCCCGGATCGGAGGAGGAGTTGCTCAACGCGCTCCGGAACCTCTCACCGCTGACCACGGTTTACGGGGACTGGGAGGGC
GTCAGTCGGGTGCTCGTGGTGCCCGGGGCCGCGCCGGACGGACTCGTGATGGAGTGCCTGCGGTGCGGTGTCGACGCTGT
GATCGCGGGAGAGATCAAGTACCATACGCGGGCGGAGCTCTTGGAGGAGGGGATCGCCGTGGTCGAGCTGGGCCACGAGT
ACAGCGAGCTGCCCGGTGTCCAGGAGCTGGCGCGCCGCGTGCGGGAGGAGTTTCGGGATCTGAACGTGGAGGTGGTGCCG
CCACCCGACATCACGATCATTCGGTGA

Upstream 100 bases:

>100_bases
CCCTCGTCGGTATCACGGTCGCGGTCGCCACGCACAGGACCGCCCGGTTGTGGGTTAGGTTTCTATCGATTGTCGACCCG
CTCGCCCGGGGCGTTCGGGC

Downstream 100 bases:

>100_bases
CCGCGTCGCTACGGTGGGATGCGCGCGTTCCCCGGTCGACGCCGTCGTCGGTGTTCGAGAGTTGGGAATCCGCGGCTCCG
CCCCCATATCGGGATCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAMVREVIDFVEELAPPDLAEDWDNPGIQVCPPGGLDRKAERVLVALDATHALERAGDADLVLTHHPLLFRPPRRIGGRW
YRVLRAVLEADAVFYAAHTNLDRAEGGVADTLARRLNLRVEREACDGFGRLCEVPGSEEELLNALRNLSPLTTVYGDWEG
VSRVLVVPGAAPDGLVMECLRCGVDAVIAGEIKYHTRAELLEEGIAVVELGHEYSELPGVQELARRVREEFRDLNVEVVP
PPDITIIR

Sequences:

>Translated_248_residues
MAMVREVIDFVEELAPPDLAEDWDNPGIQVCPPGGLDRKAERVLVALDATHALERAGDADLVLTHHPLLFRPPRRIGGRW
YRVLRAVLEADAVFYAAHTNLDRAEGGVADTLARRLNLRVEREACDGFGRLCEVPGSEEELLNALRNLSPLTTVYGDWEG
VSRVLVVPGAAPDGLVMECLRCGVDAVIAGEIKYHTRAELLEEGIAVVELGHEYSELPGVQELARRVREEFRDLNVEVVP
PPDITIIR
>Mature_247_residues
AMVREVIDFVEELAPPDLAEDWDNPGIQVCPPGGLDRKAERVLVALDATHALERAGDADLVLTHHPLLFRPPRRIGGRWY
RVLRAVLEADAVFYAAHTNLDRAEGGVADTLARRLNLRVEREACDGFGRLCEVPGSEEELLNALRNLSPLTTVYGDWEGV
SRVLVVPGAAPDGLVMECLRCGVDAVIAGEIKYHTRAELLEEGIAVVELGHEYSELPGVQELARRVREEFRDLNVEVVPP
PDITIIR

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921430, Length=270, Percent_Identity=26.2962962962963, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27408; Mature: 27276

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVREVIDFVEELAPPDLAEDWDNPGIQVCPPGGLDRKAERVLVALDATHALERAGDAD
CHHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCHHHCEEEEEECHHHHHHHCCCCC
LVLTHHPLLFRPPRRIGGRWYRVLRAVLEADAVFYAAHTNLDRAEGGVADTLARRLNLRV
EEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHCCEE
EREACDGFGRLCEVPGSEEELLNALRNLSPLTTVYGDWEGVSRVLVVPGAAPDGLVMECL
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
RCGVDAVIAGEIKYHTRAELLEEGIAVVELGHEYSELPGVQELARRVREEFRDLNVEVVP
HCCCCEEEECCCCHHHHHHHHHCCHHEEEECCHHHHCCCHHHHHHHHHHHHHHCCEEEEC
PPDITIIR
CCCEEEEC
>Mature Secondary Structure 
AMVREVIDFVEELAPPDLAEDWDNPGIQVCPPGGLDRKAERVLVALDATHALERAGDAD
HHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCHHHCEEEEEECHHHHHHHCCCCC
LVLTHHPLLFRPPRRIGGRWYRVLRAVLEADAVFYAAHTNLDRAEGGVADTLARRLNLRV
EEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHCCEE
EREACDGFGRLCEVPGSEEELLNALRNLSPLTTVYGDWEGVSRVLVVPGAAPDGLVMECL
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
RCGVDAVIAGEIKYHTRAELLEEGIAVVELGHEYSELPGVQELARRVREEFRDLNVEVVP
HCCCCEEEECCCCHHHHHHHHHCCHHEEEECCHHHHCCCHHHHHHHHHHHHHHCCEEEEC
PPDITIIR
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]