| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094596
Identifier: 20094596
GI number: 20094596
Start: 1146822
End: 1147688
Strand: Direct
Name: 20094596
Synonym: MK1160
Alternate gene names: NA
Gene position: 1146822-1147688 (Clockwise)
Preceding gene: 20094595
Following gene: 20094597
Centisome position: 67.66
GC content: 67.01
Gene sequence:
>867_bases GTGGGGATCCGAGGGTCGCGGGGGGTCGTCTCGGAGTTCGAGGGTTCTCTGAAGCGCGAGCCCGACCGGTGGTGGTTCAC GAGGTTCCTCCACGAGCACCCGATGCTACTCTCGACCTCGCTCGCACTCCTCACCCTACCCCCGGTCCTCACGGCGGGTA GGACGGTCTGGGAACTGTCCGACCGCCCCCACGATCCCGCAGCCCTTCTCGTGACGACGTCGGCGACCCTCGCCCCCGCG CTCGCCGTCTACTCCGCCCTCATGGCGTACTACACCCTCCGAGCCCGGTACCTGATCAGGGCACCGGTGGTCACCTACCC CCACCACCCGGCCTACCTGCCCCTGCTGTACTGGCTCCCCTCCTCCCGGTTACTGACCCACTGGGGCGAGCCGAAGGTGC GGTTGGGGTTCGTGGTCCTGTACACGACGGTGGTACTCCTACCCACCCTCTCGCTCCTCCTGACGTGGATCTGTCGGGTT CGGATACTCTGGTGCTGGCGTGGGGACATCGACGAGGGCACGCTGGCGCGCCTGCTCGAGCGACTACCCCGGGACTACAC GTACGCCCCCGGGTGCGTGTTCCCCGCCTTGGTGGCGATCAGCGCCTTACCCGGGGCTTTCGGGTACCTTCTGTTGAAGG GGACGTGGTCGGGGTGGTACGTGCTCGCGATCCCCGCGAGCATGATCGTGCCGATGACCGTCCTGACATACGCCGTGATC CGGAAGATGAGTCGGTCTCCCGTCGAAGAGCTGACGGACGAGTGGTTGGGTGAGGGGAACGCTCCCTGGCGGCTCGATCT GCAGGCTCTGGCCATCCTCGCGACGTTCGCGACCTGGACGCTGGTGGACGTGGGAGGCATGAGGTGA
Upstream 100 bases:
>100_bases TAGCCGACCCCCACCTTGATCCACCGGAGTGTTAAATACGGGGGGAGACACCATCGGATCGTCACGGGGATCCCGGTGGA GCGGGCGATCGCCCGTGTTT
Downstream 100 bases:
>100_bases CCCTCCCGCGGGGACCCAGGACGACGCTGAGGCGATTTACCGGAGGCGTAACCCCGTGAGTTTCGAGTCGGACTCTTGCG GCGAGGTGTCAGAATAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MGIRGSRGVVSEFEGSLKREPDRWWFTRFLHEHPMLLSTSLALLTLPPVLTAGRTVWELSDRPHDPAALLVTTSATLAPA LAVYSALMAYYTLRARYLIRAPVVTYPHHPAYLPLLYWLPSSRLLTHWGEPKVRLGFVVLYTTVVLLPTLSLLLTWICRV RILWCWRGDIDEGTLARLLERLPRDYTYAPGCVFPALVAISALPGAFGYLLLKGTWSGWYVLAIPASMIVPMTVLTYAVI RKMSRSPVEELTDEWLGEGNAPWRLDLQALAILATFATWTLVDVGGMR
Sequences:
>Translated_288_residues MGIRGSRGVVSEFEGSLKREPDRWWFTRFLHEHPMLLSTSLALLTLPPVLTAGRTVWELSDRPHDPAALLVTTSATLAPA LAVYSALMAYYTLRARYLIRAPVVTYPHHPAYLPLLYWLPSSRLLTHWGEPKVRLGFVVLYTTVVLLPTLSLLLTWICRV RILWCWRGDIDEGTLARLLERLPRDYTYAPGCVFPALVAISALPGAFGYLLLKGTWSGWYVLAIPASMIVPMTVLTYAVI RKMSRSPVEELTDEWLGEGNAPWRLDLQALAILATFATWTLVDVGGMR >Mature_287_residues GIRGSRGVVSEFEGSLKREPDRWWFTRFLHEHPMLLSTSLALLTLPPVLTAGRTVWELSDRPHDPAALLVTTSATLAPAL AVYSALMAYYTLRARYLIRAPVVTYPHHPAYLPLLYWLPSSRLLTHWGEPKVRLGFVVLYTTVVLLPTLSLLLTWICRVR ILWCWRGDIDEGTLARLLERLPRDYTYAPGCVFPALVAISALPGAFGYLLLKGTWSGWYVLAIPASMIVPMTVLTYAVIR KMSRSPVEELTDEWLGEGNAPWRLDLQALAILATFATWTLVDVGGMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32390; Mature: 32258
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRGSRGVVSEFEGSLKREPDRWWFTRFLHEHPMLLSTSLALLTLPPVLTAGRTVWELS CCCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCEEEECC DRPHDPAALLVTTSATLAPALAVYSALMAYYTLRARYLIRAPVVTYPHHPAYLPLLYWLP CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHCC SSRLLTHWGEPKVRLGFVVLYTTVVLLPTLSLLLTWICRVRILWCWRGDIDEGTLARLLE CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH RLPRDYTYAPGCVFPALVAISALPGAFGYLLLKGTWSGWYVLAIPASMIVPMTVLTYAVI HCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHH RKMSRSPVEELTDEWLGEGNAPWRLDLQALAILATFATWTLVDVGGMR HHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GIRGSRGVVSEFEGSLKREPDRWWFTRFLHEHPMLLSTSLALLTLPPVLTAGRTVWELS CCCCCCCCHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCEEEECC DRPHDPAALLVTTSATLAPALAVYSALMAYYTLRARYLIRAPVVTYPHHPAYLPLLYWLP CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHCC SSRLLTHWGEPKVRLGFVVLYTTVVLLPTLSLLLTWICRVRILWCWRGDIDEGTLARLLE CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH RLPRDYTYAPGCVFPALVAISALPGAFGYLLLKGTWSGWYVLAIPASMIVPMTVLTYAVI HCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHH RKMSRSPVEELTDEWLGEGNAPWRLDLQALAILATFATWTLVDVGGMR HHHCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA