Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094595

Identifier: 20094595

GI number: 20094595

Start: 1145844

End: 1146677

Strand: Direct

Name: 20094595

Synonym: MK1159

Alternate gene names: NA

Gene position: 1145844-1146677 (Clockwise)

Preceding gene: 20094592

Following gene: 20094596

Centisome position: 67.6

GC content: 64.51

Gene sequence:

>834_bases
TTGGTCTGTGGCGATCCCCGGTTGCGGGAGATCGTGTTGGAGTTTCGGGATTCCGTGAGGGTCGGGTCGAGTCGGGTGGG
CGGCGTCCTCCGGAAGCTCTACCCCATCCTCTCACTGTACGTAATATTGAGCCTGGTCTTCGAGGGTCGTGGGGTCGTTC
GGGTACTGTGGGATCGGGCGTCGGCCCCGCTCGCGATGATCGTGATCGCCGGCGCGTGCATCGCCCCAATCCTCGCCGCG
TACCTGGCCTTCCACGGGTATCTCACGCTCGAGGCCCGCAGGAGGCTTCGAGCTCCCGTCGTCACCCGACCGCACAACCC
GACGCTCCTCTTGCTACCCTTCCTCCTAGCCCTGCTCCGCCCTGATTACTACGTTCACCACTGGCCGGAGACCCGGGTCG
CCCTAGCCTACCTCTACGCGGGATGCGCCCTCTCCCCCACCCTCGCGCTCGCCGTGATGTGGGTGTTGAGAACGCGAGTC
GTCTGGTGTTGGAAGAGGGACCTGGACGAGGAAGTGTTAGAACGCTTCGTCGAGGGGCTCCCCGACGGACGGTACGTACC
CGGCAGTCTGATCCCCTACGCGTCTAACGTCGGGACGCTCGCCGTCGCCATCGCCGTCGACGCGCCGTCCCTCACGCCCT
ATCTGATCACCGCCGGTACGCTCTCCGTGCTAGCCCTCACGACCTACATCTCGACGTTCACCGAGGGGGATCTCCTCGAC
ATCCTCGGCAAGCTCCGGAGCGGACCATGGCGCGATGACTCGTACGTGATCGGCTTCACGATCCTCATCCTGGAGAGGAG
CTTCTGGCTGATAATCGAGCACTCGCACCCCTAG

Upstream 100 bases:

>100_bases
TACGGTTATATAATCGGTCCGGTGTTCGTCCGCGTCCGTGCGCGGCGTCACGAGACCGACGCCGTGCGGGGGATCTCGCC
CGTGGCGGACCTTCCTGCGG

Downstream 100 bases:

>100_bases
AGGTTCGACGTCACGTCCGGTGAGTGGCGGTGGCTACGTCCGGCTAGCCGACCCCCACCTTGATCCACCGGAGTGTTAAA
TACGGGGGGAGACACCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MVCGDPRLREIVLEFRDSVRVGSSRVGGVLRKLYPILSLYVILSLVFEGRGVVRVLWDRASAPLAMIVIAGACIAPILAA
YLAFHGYLTLEARRRLRAPVVTRPHNPTLLLLPFLLALLRPDYYVHHWPETRVALAYLYAGCALSPTLALAVMWVLRTRV
VWCWKRDLDEEVLERFVEGLPDGRYVPGSLIPYASNVGTLAVAIAVDAPSLTPYLITAGTLSVLALTTYISTFTEGDLLD
ILGKLRSGPWRDDSYVIGFTILILERSFWLIIEHSHP

Sequences:

>Translated_277_residues
MVCGDPRLREIVLEFRDSVRVGSSRVGGVLRKLYPILSLYVILSLVFEGRGVVRVLWDRASAPLAMIVIAGACIAPILAA
YLAFHGYLTLEARRRLRAPVVTRPHNPTLLLLPFLLALLRPDYYVHHWPETRVALAYLYAGCALSPTLALAVMWVLRTRV
VWCWKRDLDEEVLERFVEGLPDGRYVPGSLIPYASNVGTLAVAIAVDAPSLTPYLITAGTLSVLALTTYISTFTEGDLLD
ILGKLRSGPWRDDSYVIGFTILILERSFWLIIEHSHP
>Mature_277_residues
MVCGDPRLREIVLEFRDSVRVGSSRVGGVLRKLYPILSLYVILSLVFEGRGVVRVLWDRASAPLAMIVIAGACIAPILAA
YLAFHGYLTLEARRRLRAPVVTRPHNPTLLLLPFLLALLRPDYYVHHWPETRVALAYLYAGCALSPTLALAVMWVLRTRV
VWCWKRDLDEEVLERFVEGLPDGRYVPGSLIPYASNVGTLAVAIAVDAPSLTPYLITAGTLSVLALTTYISTFTEGDLLD
ILGKLRSGPWRDDSYVIGFTILILERSFWLIIEHSHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30908; Mature: 30908

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCGDPRLREIVLEFRDSVRVGSSRVGGVLRKLYPILSLYVILSLVFEGRGVVRVLWDRA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SAPLAMIVIAGACIAPILAAYLAFHGYLTLEARRRLRAPVVTRPHNPTLLLLPFLLALLR
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCCCCCCCCCCCEEHHHHHHHHHC
PDYYVHHWPETRVALAYLYAGCALSPTLALAVMWVLRTRVVWCWKRDLDEEVLERFVEGL
CCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDGRYVPGSLIPYASNVGTLAVAIAVDAPSLTPYLITAGTLSVLALTTYISTFTEGDLLD
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHH
ILGKLRSGPWRDDSYVIGFTILILERSFWLIIEHSHP
HHHHHCCCCCCCCCEEHHHHHEEECCCEEEEEECCCC
>Mature Secondary Structure
MVCGDPRLREIVLEFRDSVRVGSSRVGGVLRKLYPILSLYVILSLVFEGRGVVRVLWDRA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SAPLAMIVIAGACIAPILAAYLAFHGYLTLEARRRLRAPVVTRPHNPTLLLLPFLLALLR
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCCCCCCCCCCCEEHHHHHHHHHC
PDYYVHHWPETRVALAYLYAGCALSPTLALAVMWVLRTRVVWCWKRDLDEEVLERFVEGL
CCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDGRYVPGSLIPYASNVGTLAVAIAVDAPSLTPYLITAGTLSVLALTTYISTFTEGDLLD
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHH
ILGKLRSGPWRDDSYVIGFTILILERSFWLIIEHSHP
HHHHHCCCCCCCCCEEHHHHHEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA