| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094361
Identifier: 20094361
GI number: 20094361
Start: 883220
End: 884197
Strand: Reverse
Name: 20094361
Synonym: MK0925
Alternate gene names: NA
Gene position: 884197-883220 (Counterclockwise)
Preceding gene: 20094365
Following gene: 20094359
Centisome position: 52.17
GC content: 62.07
Gene sequence:
>978_bases GTGAGGTGGACCCCCGCACTGACGGCGATCGTGACGCTCCTAGCCCCTGTCTCATCGACGATGGTGAACGTCGCCATGTG GGCGGGAGACGGAGCCGCGTCCAACTGCGTGGAAAGCTCGCTGAGGGCCATCGAGTACTGGAACGCGAACTACGCCGGCA CCTATCACATTAACGTGATCACCTACGCATCACCGTCGGACTGGAGGACCGTCCTGGAGACCGGACGAGATCCGTACACA GGCACCCACATCGACGTGATCTACGTTCCGGGCGGGTACCATCCCGAGTGGCACTGGGATCCCGACTGGATCGACCTGCT ATATCACGCGCAGATCGACCTCGGCATCGGGTACGTCGGCATCTGCGCGGGTGCGTACCTACACGCCGGAGTGACGCACC GAGGAGCCATCGGCGAGGATCTCGTGGTGGACGGCGTAACGGCGATCGACGGCAACCGGGGGAACGGGTACGTCTCCGTG CTGATCCAGCAGAACCCCATCACCCCGCAGTCCACCTGGGGGAAGGTCTACGAGTATTACTACGCGAACGGTCCCGGGAT GGCCGCGGAAGACGGGTCGGTGTTCATCTCCGACAACAGATGGTACAAAGTGTGCTGGCTAGACGGGAAAGAGGTCAGGA TCAACGTACAGGGGTTCGGAAAGTACGTCGAACTCGTCAGTGGTTGGGCGATGGTGCTCGGCTGGTACAACGTGAAGAAG GGCGACAAGTGGGAACCACGGGGTCGGTTCGTCTTACTGGGCGTGCACCCGGAACTGACCGAACGCACGGGAGCCTGGAA GCTACTGGCGCGCGCCCTGATCTGGGCGGCCGGGTACGAGCCGAAGGAAACCCCGACGAAAAAACAGGGCCCTAGTGAAC AAACGCCGTTAGTGCCAGTACCACCGATATGTTCGCCAAGGTCTCGACGAGCGTGCGGACGGTCGCCCCGAGCAACCCCT TCTTGCCAAGGAACGTGA
Upstream 100 bases:
>100_bases GCCAGTTTCGACCTCAAGGACACGACACGTCCCCTACCGGTGTAACGTGTTTCCCGTAGTTTGATTAACGATCCCGGCTG CGGAGTGAGGGGGTGTTAAC
Downstream 100 bases:
>100_bases CGGCAGGAGGAAACAGGAACTGAAGGTTAATCCTCGGCAAAGAAAGGGCCCTACCGAACGCCAACGCGAGCGCCAGATCC TCCATCCGCAGCTTCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRWTPALTAIVTLLAPVSSTMVNVAMWAGDGAASNCVESSLRAIEYWNANYAGTYHINVITYASPSDWRTVLETGRDPYT GTHIDVIYVPGGYHPEWHWDPDWIDLLYHAQIDLGIGYVGICAGAYLHAGVTHRGAIGEDLVVDGVTAIDGNRGNGYVSV LIQQNPITPQSTWGKVYEYYYANGPGMAAEDGSVFISDNRWYKVCWLDGKEVRINVQGFGKYVELVSGWAMVLGWYNVKK GDKWEPRGRFVLLGVHPELTERTGAWKLLARALIWAAGYEPKETPTKKQGPSEQTPLVPVPPICSPRSRRACGRSPRATP SCQGT
Sequences:
>Translated_325_residues MRWTPALTAIVTLLAPVSSTMVNVAMWAGDGAASNCVESSLRAIEYWNANYAGTYHINVITYASPSDWRTVLETGRDPYT GTHIDVIYVPGGYHPEWHWDPDWIDLLYHAQIDLGIGYVGICAGAYLHAGVTHRGAIGEDLVVDGVTAIDGNRGNGYVSV LIQQNPITPQSTWGKVYEYYYANGPGMAAEDGSVFISDNRWYKVCWLDGKEVRINVQGFGKYVELVSGWAMVLGWYNVKK GDKWEPRGRFVLLGVHPELTERTGAWKLLARALIWAAGYEPKETPTKKQGPSEQTPLVPVPPICSPRSRRACGRSPRATP SCQGT >Mature_325_residues MRWTPALTAIVTLLAPVSSTMVNVAMWAGDGAASNCVESSLRAIEYWNANYAGTYHINVITYASPSDWRTVLETGRDPYT GTHIDVIYVPGGYHPEWHWDPDWIDLLYHAQIDLGIGYVGICAGAYLHAGVTHRGAIGEDLVVDGVTAIDGNRGNGYVSV LIQQNPITPQSTWGKVYEYYYANGPGMAAEDGSVFISDNRWYKVCWLDGKEVRINVQGFGKYVELVSGWAMVLGWYNVKK GDKWEPRGRFVLLGVHPELTERTGAWKLLARALIWAAGYEPKETPTKKQGPSEQTPLVPVPPICSPRSRRACGRSPRATP SCQGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35863; Mature: 35863
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTPALTAIVTLLAPVSSTMVNVAMWAGDGAASNCVESSLRAIEYWNANYAGTYHINVI CCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHEEEECCCCCCEEEEEEEE TYASPSDWRTVLETGRDPYTGTHIDVIYVPGGYHPEWHWDPDWIDLLYHAQIDLGIGYVG EECCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCHHH ICAGAYLHAGVTHRGAIGEDLVVDGVTAIDGNRGNGYVSVLIQQNPITPQSTWGKVYEYY HHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEE YANGPGMAAEDGSVFISDNRWYKVCWLDGKEVRINVQGFGKYVELVSGWAMVLGWYNVKK EECCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHEEEEEEEECCC GDKWEPRGRFVLLGVHPELTERTGAWKLLARALIWAAGYEPKETPTKKQGPSEQTPLVPV CCCCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PPICSPRSRRACGRSPRATPSCQGT CCCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MRWTPALTAIVTLLAPVSSTMVNVAMWAGDGAASNCVESSLRAIEYWNANYAGTYHINVI CCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHEEEECCCCCCEEEEEEEE TYASPSDWRTVLETGRDPYTGTHIDVIYVPGGYHPEWHWDPDWIDLLYHAQIDLGIGYVG EECCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCHHH ICAGAYLHAGVTHRGAIGEDLVVDGVTAIDGNRGNGYVSVLIQQNPITPQSTWGKVYEYY HHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEE YANGPGMAAEDGSVFISDNRWYKVCWLDGKEVRINVQGFGKYVELVSGWAMVLGWYNVKK EECCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHEEEEEEEECCC GDKWEPRGRFVLLGVHPELTERTGAWKLLARALIWAAGYEPKETPTKKQGPSEQTPLVPV CCCCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PPICSPRSRRACGRSPRATPSCQGT CCCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA