| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094331
Identifier: 20094331
GI number: 20094331
Start: 843334
End: 844707
Strand: Reverse
Name: 20094331
Synonym: MK0895
Alternate gene names: NA
Gene position: 844707-843334 (Counterclockwise)
Preceding gene: 20094332
Following gene: 20094329
Centisome position: 49.84
GC content: 61.86
Gene sequence:
>1374_bases GTGAAAGTCTTGTTGGTTCAACCTCCGTTCGAGGACGACATCGCCCGCGTGCTGGGAGTACGGGGATTCCCGATCGGACT AGTCTACCTGGCCGCCAAGCTCGAGAAGGAAGGGTTCTCCGTCGACATCCTGGACTGTCCCGCCGAAGGTGTTGAGATGG AGGACCTACGGGGAAGGATCAGAGGCTACGACGCGGTAGGGATAACGGCCACGACCCCGGTGGCGCCGTCGGCGTACAAG GTCGCGAAGCTGGCAAAGGATGAGGGGGCATTCGTGTTTCTGGGCGGCCCGCACCCCACCTTCATGGACCGAGAGGCCCT CAGGGAAAGCCCTGCCGACGTGGTAATCCGGGGCGAGGGAGAATCGACGACTGTCGAGGTACTGGAGGCCGTAGATCGGT GGGAGGAGTCAGACCTTTCGAATATTCCCGGAATCACCTACAGGGAGGGCTCTAAAATTGTTCGAAATCCCGACCGACAG GAGCCGGAAGACCTAGATTCGCTACCGCTCCCGGCGTACGACAAGGTAGACCTGGACCAGTACTCCGCGGACAGCGTCCG GTTCGTCCCCGTCATCACGAGCCGCGGCTGCCCGTTCCGGTGCCTCTTCTGCGCCTCCTCCAGGATCTTCGGACCCAAGT GGCGAGGGAAGAGCCCGGATCGGGTGGTCGAGGAGATCTCTTACTTGGTGGAAGAGCTGGGAGTGGAGCGACTCGAGTTC GTCGACGACGTGTTTACTGCCCATAAGCGAAGGGTGCGGGAGATATGTGAGAAAATGAGGGAGGAAGGTATCGACGTCCC GTGGGACTGCGGCGCCCGCGCGGACACGCTCACGCCGGAGCTCGCCCGCACGATACGCGAGCACGGGTGCCGCACGGTAT ACGTCGGGGCCGAATCGGCCAGCAACGAAACCCTGAAACGCATCAACAAGGGGATCACCGTCCAGGACGTCATCGCGTGC CGTAAGGTGGCGAAAAGGCACGGACTCAGGATCTTATTATCATTCATCCTGGGGTTCCCATGGGAGGATCGCGAGGACGT CTTCAGGACGATCAAGTTCGCGCGCCGCCTCGAGCCGGACTACGTGCAGTTCACGGTGTGCACGCCCTACCCGGGAACGC CGCTGTACGACCTCGCCAAGGAGAGGGGACTGATCGAGGTTCACGACTGGTCGAAGTATACCACGGTAGATCCGGTGATG AGGACTGAGCACCTGAGCACCAGGGAGCTGGGGCGCCTGCTGCAGCGCGCGTACCTGTCGTTCTACCTGAACCCCCGGTA CCTGCTGAACGCGCTGCGAGAGGGCAAGCTGTTCCTGTTCAAGCGGATCGTTAAGTCCGGGATCCGCGCGGTGCTGTCGT ACCTGAGCCGGTGA
Upstream 100 bases:
>100_bases ACCGGTACGTGTGCGGCGGATGCCGGGCCCGTGCGTACGCGATCACGGGCAAGGTGGAGGGGCCCGACCCGGGCTGTGTC CTAGTGGGGGATGCTAACAA
Downstream 100 bases:
>100_bases TCAGCTCCCCGAAAACTCATCACAGATCAGGAGCGGTCCGCGGTCATCACCGCTAAGGCACGACGACGGCGATGACCCGG GTAAGGCTGCCGTGGACCCG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKVLLVQPPFEDDIARVLGVRGFPIGLVYLAAKLEKEGFSVDILDCPAEGVEMEDLRGRIRGYDAVGITATTPVAPSAYK VAKLAKDEGAFVFLGGPHPTFMDREALRESPADVVIRGEGESTTVEVLEAVDRWEESDLSNIPGITYREGSKIVRNPDRQ EPEDLDSLPLPAYDKVDLDQYSADSVRFVPVITSRGCPFRCLFCASSRIFGPKWRGKSPDRVVEEISYLVEELGVERLEF VDDVFTAHKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESASNETLKRINKGITVQDVIAC RKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPDYVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTVDPVM RTEHLSTRELGRLLQRAYLSFYLNPRYLLNALREGKLFLFKRIVKSGIRAVLSYLSR
Sequences:
>Translated_457_residues MKVLLVQPPFEDDIARVLGVRGFPIGLVYLAAKLEKEGFSVDILDCPAEGVEMEDLRGRIRGYDAVGITATTPVAPSAYK VAKLAKDEGAFVFLGGPHPTFMDREALRESPADVVIRGEGESTTVEVLEAVDRWEESDLSNIPGITYREGSKIVRNPDRQ EPEDLDSLPLPAYDKVDLDQYSADSVRFVPVITSRGCPFRCLFCASSRIFGPKWRGKSPDRVVEEISYLVEELGVERLEF VDDVFTAHKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESASNETLKRINKGITVQDVIAC RKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPDYVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTVDPVM RTEHLSTRELGRLLQRAYLSFYLNPRYLLNALREGKLFLFKRIVKSGIRAVLSYLSR >Mature_457_residues MKVLLVQPPFEDDIARVLGVRGFPIGLVYLAAKLEKEGFSVDILDCPAEGVEMEDLRGRIRGYDAVGITATTPVAPSAYK VAKLAKDEGAFVFLGGPHPTFMDREALRESPADVVIRGEGESTTVEVLEAVDRWEESDLSNIPGITYREGSKIVRNPDRQ EPEDLDSLPLPAYDKVDLDQYSADSVRFVPVITSRGCPFRCLFCASSRIFGPKWRGKSPDRVVEEISYLVEELGVERLEF VDDVFTAHKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESASNETLKRINKGITVQDVIAC RKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPDYVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTVDPVM RTEHLSTRELGRLLQRAYLSFYLNPRYLLNALREGKLFLFKRIVKSGIRAVLSYLSR
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 51855; Mature: 51855
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLVQPPFEDDIARVLGVRGFPIGLVYLAAKLEKEGFSVDILDCPAEGVEMEDLRGRI CEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH RGYDAVGITATTPVAPSAYKVAKLAKDEGAFVFLGGPHPTFMDREALRESPADVVIRGEG CCCCEECEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEECCC ESTTVEVLEAVDRWEESDLSNIPGITYREGSKIVRNPDRQEPEDLDSLPLPAYDKVDLDQ CCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC YSADSVRFVPVITSRGCPFRCLFCASSRIFGPKWRGKSPDRVVEEISYLVEELGVERLEF CCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH VDDVFTAHKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC SNETLKRINKGITVQDVIACRKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPD CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC YVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTVDPVMRTEHLSTRELGRLLQRAYLS EEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH FYLNPRYLLNALREGKLFLFKRIVKSGIRAVLSYLSR HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVLLVQPPFEDDIARVLGVRGFPIGLVYLAAKLEKEGFSVDILDCPAEGVEMEDLRGRI CEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH RGYDAVGITATTPVAPSAYKVAKLAKDEGAFVFLGGPHPTFMDREALRESPADVVIRGEG CCCCEECEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEECCC ESTTVEVLEAVDRWEESDLSNIPGITYREGSKIVRNPDRQEPEDLDSLPLPAYDKVDLDQ CCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC YSADSVRFVPVITSRGCPFRCLFCASSRIFGPKWRGKSPDRVVEEISYLVEELGVERLEF CCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH VDDVFTAHKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC SNETLKRINKGITVQDVIACRKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPD CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC YVQFTVCTPYPGTPLYDLAKERGLIEVHDWSKYTTVDPVMRTEHLSTRELGRLLQRAYLS EEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH FYLNPRYLLNALREGKLFLFKRIVKSGIRAVLSYLSR HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]