| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094326
Identifier: 20094326
GI number: 20094326
Start: 838029
End: 839210
Strand: Reverse
Name: 20094326
Synonym: MK0890
Alternate gene names: NA
Gene position: 839210-838029 (Counterclockwise)
Preceding gene: 20094328
Following gene: 20094325
Centisome position: 49.51
GC content: 60.24
Gene sequence:
>1182_bases GTGGGTCGGACTTGCTCCGGTGGAGCGTTTCTCGGAATCTTTTCCGGGATGCTATCGGGGTACATCCCCGGTCTCCATCC GAATACGTTTTTTTCGGAGTTCGATCCCACGTACCTCGACCGTGAAGACGTGTTGACATTCGCTTCAGCGTGCTCAGCCG TCAACGTCCCGTTGTCTAAGGTTGAAAGCATGTTCTTGGGAGTACCTGACGATCAGGCGTCGGTTGCCGTGTTGATTCCG TTGCAGCGCTATACGATCGAGGGAAGGGCGGAAGAAGCCGCTCGCCTCGTCGCCCTAGGGACGTTATCCACGGGCTTTTT CGCGGCGGTCGCGCTCCCATACATCGTGAAAATCGTAGGACCCATGTACGTCGCCTCCAAGCCGATAATACCGTGGCTGG TACTGACGATCCTGGCCTTACAAACGTACGATAATGGACTCCGCGGGTTGGCGGTCTTCTCGGCGAGTTCCGCGGTAGGC TACGTAGTTCTTTCGGGACCGCTCGACGTAGCCTCCCCACTGGAAGCCATGCTCTCCGGATTCTACGCGATCGGGCCAGG GCTTTCCTGTCTGATGAACCGCACTTCGATCCCGAAGCAGCGGCCTGGAAAGCCCGCAATATCTGGAAAGGAGCTCCCGA AATGCGGAATCCTGGCCGCACTCGCGGGTTGTGCTCTCGGTTTCCTGCCGGGATTGGGACCCGCCAACGTGGTTTCCGTC CTGACGCGGTTGGGCGTCGACACGACCGAGCGGTACCTGCTGGTCACCTCCGGTATCGACGCCGCCGACGCGGTGTCCTC GATCGTGGCGCTACACGCGCTTGGGAACCCTAGGAGTGGAGCTTCGGTGTTCATCCAACGATCCGTTGGAGATATCACGT ACCCCGAAGTGTTGGCGTCGGTGGGAGTGTACCTACTCGTGTCGGTGTTGGGAGCGTGGCTGCTCATCTTTTCGACCAGG GTGTTGGGAGGGGTGCTCTCCGGAGCACGGGCGCGAGTACTGACCGGTACCGTAGTACTCGGACTGCTCGCGTTGATGAC ATTTCATGGGTTAGGTTCGCTCGGTACGGCGATCGCGTGTGCGGGAATAGGGATTTACGCGCTCCGCTCCGGCGTCGATC CGTCGCTCTGCACGTCAGCGCTGGCCTTGCCGACGGCTCTGAAGCTGCTGGGGGTCGGGTGA
Upstream 100 bases:
>100_bases TGTGAACCGTAAGTGCTAGGAGTCCGAGTGTCCACGCAGCCCCTAGCGCCATCGCAAACGATCGCCATAGCTCCTTTAGC ATCTCGAAGTCCCCGGTCCG
Downstream 100 bases:
>100_bases GTTTGGAAAAAGTCGACCTGGAGCGCCTCCTCGAGCACATAGAAGAGACTAACTTCTGCCGCAGGTTATTCAGGGAAGTC TCGGAGGAGTGGAAGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIP LQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVG YVVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTR VLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG
Sequences:
>Translated_393_residues MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIP LQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVG YVVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTR VLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG >Mature_392_residues GRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIPL QRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGY VVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSVL TRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTRV LGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG
Specific function: Unknown
COG id: COG1784
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 40378; Mature: 40247
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSK CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH VESMFLGVPDDQASVAVLIPLQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVG HHHHHCCCCCCCCCEEEEEEHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGYVVLSGPLDVASPLEAMLSG HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH FYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLAS HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH VGVYLLVSVLGAWLLIFSTRVLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIAC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AGIGIYALRSGVDPSLCTSALALPTALKLLGVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSK CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH VESMFLGVPDDQASVAVLIPLQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVG HHHHHCCCCCCCCCEEEEEEHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGYVVLSGPLDVASPLEAMLSG HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH FYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLAS HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH VGVYLLVSVLGAWLLIFSTRVLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIAC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AGIGIYALRSGVDPSLCTSALALPTALKLLGVG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]