Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094326

Identifier: 20094326

GI number: 20094326

Start: 838029

End: 839210

Strand: Reverse

Name: 20094326

Synonym: MK0890

Alternate gene names: NA

Gene position: 839210-838029 (Counterclockwise)

Preceding gene: 20094328

Following gene: 20094325

Centisome position: 49.51

GC content: 60.24

Gene sequence:

>1182_bases
GTGGGTCGGACTTGCTCCGGTGGAGCGTTTCTCGGAATCTTTTCCGGGATGCTATCGGGGTACATCCCCGGTCTCCATCC
GAATACGTTTTTTTCGGAGTTCGATCCCACGTACCTCGACCGTGAAGACGTGTTGACATTCGCTTCAGCGTGCTCAGCCG
TCAACGTCCCGTTGTCTAAGGTTGAAAGCATGTTCTTGGGAGTACCTGACGATCAGGCGTCGGTTGCCGTGTTGATTCCG
TTGCAGCGCTATACGATCGAGGGAAGGGCGGAAGAAGCCGCTCGCCTCGTCGCCCTAGGGACGTTATCCACGGGCTTTTT
CGCGGCGGTCGCGCTCCCATACATCGTGAAAATCGTAGGACCCATGTACGTCGCCTCCAAGCCGATAATACCGTGGCTGG
TACTGACGATCCTGGCCTTACAAACGTACGATAATGGACTCCGCGGGTTGGCGGTCTTCTCGGCGAGTTCCGCGGTAGGC
TACGTAGTTCTTTCGGGACCGCTCGACGTAGCCTCCCCACTGGAAGCCATGCTCTCCGGATTCTACGCGATCGGGCCAGG
GCTTTCCTGTCTGATGAACCGCACTTCGATCCCGAAGCAGCGGCCTGGAAAGCCCGCAATATCTGGAAAGGAGCTCCCGA
AATGCGGAATCCTGGCCGCACTCGCGGGTTGTGCTCTCGGTTTCCTGCCGGGATTGGGACCCGCCAACGTGGTTTCCGTC
CTGACGCGGTTGGGCGTCGACACGACCGAGCGGTACCTGCTGGTCACCTCCGGTATCGACGCCGCCGACGCGGTGTCCTC
GATCGTGGCGCTACACGCGCTTGGGAACCCTAGGAGTGGAGCTTCGGTGTTCATCCAACGATCCGTTGGAGATATCACGT
ACCCCGAAGTGTTGGCGTCGGTGGGAGTGTACCTACTCGTGTCGGTGTTGGGAGCGTGGCTGCTCATCTTTTCGACCAGG
GTGTTGGGAGGGGTGCTCTCCGGAGCACGGGCGCGAGTACTGACCGGTACCGTAGTACTCGGACTGCTCGCGTTGATGAC
ATTTCATGGGTTAGGTTCGCTCGGTACGGCGATCGCGTGTGCGGGAATAGGGATTTACGCGCTCCGCTCCGGCGTCGATC
CGTCGCTCTGCACGTCAGCGCTGGCCTTGCCGACGGCTCTGAAGCTGCTGGGGGTCGGGTGA

Upstream 100 bases:

>100_bases
TGTGAACCGTAAGTGCTAGGAGTCCGAGTGTCCACGCAGCCCCTAGCGCCATCGCAAACGATCGCCATAGCTCCTTTAGC
ATCTCGAAGTCCCCGGTCCG

Downstream 100 bases:

>100_bases
GTTTGGAAAAAGTCGACCTGGAGCGCCTCCTCGAGCACATAGAAGAGACTAACTTCTGCCGCAGGTTATTCAGGGAAGTC
TCGGAGGAGTGGAAGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIP
LQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVG
YVVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV
LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTR
VLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG

Sequences:

>Translated_393_residues
MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIP
LQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVG
YVVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV
LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTR
VLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG
>Mature_392_residues
GRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSKVESMFLGVPDDQASVAVLIPL
QRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVGPMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGY
VVLSGPLDVASPLEAMLSGFYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSVL
TRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLASVGVYLLVSVLGAWLLIFSTRV
LGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIACAGIGIYALRSGVDPSLCTSALALPTALKLLGVG

Specific function: Unknown

COG id: COG1784

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 40378; Mature: 40247

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSK
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH
VESMFLGVPDDQASVAVLIPLQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVG
HHHHHCCCCCCCCCEEEEEEHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGYVVLSGPLDVASPLEAMLSG
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH
FYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV
HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLAS
HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
VGVYLLVSVLGAWLLIFSTRVLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIAC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGIGIYALRSGVDPSLCTSALALPTALKLLGVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRTCSGGAFLGIFSGMLSGYIPGLHPNTFFSEFDPTYLDREDVLTFASACSAVNVPLSK
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH
VESMFLGVPDDQASVAVLIPLQRYTIEGRAEEAARLVALGTLSTGFFAAVALPYIVKIVG
HHHHHCCCCCCCCCEEEEEEHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMYVASKPIIPWLVLTILALQTYDNGLRGLAVFSASSAVGYVVLSGPLDVASPLEAMLSG
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHH
FYAIGPGLSCLMNRTSIPKQRPGKPAISGKELPKCGILAALAGCALGFLPGLGPANVVSV
HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LTRLGVDTTERYLLVTSGIDAADAVSSIVALHALGNPRSGASVFIQRSVGDITYPEVLAS
HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
VGVYLLVSVLGAWLLIFSTRVLGGVLSGARARVLTGTVVLGLLALMTFHGLGSLGTAIAC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGIGIYALRSGVDPSLCTSALALPTALKLLGVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]