| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is HisB
Identifier: 20094291
GI number: 20094291
Start: 812269
End: 812874
Strand: Reverse
Name: HisB
Synonym: MK0855
Alternate gene names: 20094291
Gene position: 812874-812269 (Counterclockwise)
Preceding gene: 20094294
Following gene: 20094290
Centisome position: 47.96
GC content: 56.93
Gene sequence:
>606_bases GTGAACTCGGTGCGGACGGCGGATGTCAAGCGTACGACGAAGGAAACGGAAGTTGAGGTGAGCGTGAACCTAGACGGATC CGGTCGCGCTAAGGTCGACACCGGTCTTCCGTTTTTCGACCACCTCCTGCACCAGTTCGCCTTTCACGGACGTATAGATG TTGAGATCAAAGCCCGAGGCGACCTAGAGGTCGACGATCATCACACCGTCGAGGACGTCGGTATATGCCTGGGTAAAGCC TTGAACGAAGCACTCGGAGATCGCGAGGGTATCCGACGGATCGCATGGGCACTGGTACCTATGGATGAAGCGCTAGTAGA ATGTGCTGTAGATATCTCCGGAAGGCCTTACTTCGTCTTAAAGGGGTACCGACCCCGACGCAATAGAATCGGTTCTCCTC CATTATCCACGGAGAACGTCTCGCACTTCTGGAAAAGCTTCTGCGACCACGCCGGCGTAACCATGCATGTGGTGGTACGG TGGTGGGACAACGACCATCACGCCATCGAAGCCATGTTTAAGGCCGTAGGCCGCGCACTCGGCGCAGCGAAGGAAATCGT CGGTGACGGAGTGCCATCCACTAAGGGAACGCTCCGACGCGGGTGA
Upstream 100 bases:
>100_bases TAGGACGATGCAGACGATGGAAACCGTCCTCTCCATGGGGACCCTAGATCGGGCCGCACGTCCGTGCTATTTACCGCCAC CAACCGACGTTTGCGATGGG
Downstream 100 bases:
>100_bases GCGGATGAAAGCTTTCAGTCTCGTAGAACCGTCCCCGGCCAAGAACCTCCTCCCGGTGTGGGAGCGACTCCTGGAGGAAG GGTGGGAAGTAACAGTATAC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNSVRTADVKRTTKETEVEVSVNLDGSGRAKVDTGLPFFDHLLHQFAFHGRIDVEIKARGDLEVDDHHTVEDVGICLGKA LNEALGDREGIRRIAWALVPMDEALVECAVDISGRPYFVLKGYRPRRNRIGSPPLSTENVSHFWKSFCDHAGVTMHVVVR WWDNDHHAIEAMFKAVGRALGAAKEIVGDGVPSTKGTLRRG
Sequences:
>Translated_201_residues MNSVRTADVKRTTKETEVEVSVNLDGSGRAKVDTGLPFFDHLLHQFAFHGRIDVEIKARGDLEVDDHHTVEDVGICLGKA LNEALGDREGIRRIAWALVPMDEALVECAVDISGRPYFVLKGYRPRRNRIGSPPLSTENVSHFWKSFCDHAGVTMHVVVR WWDNDHHAIEAMFKAVGRALGAAKEIVGDGVPSTKGTLRRG >Mature_201_residues MNSVRTADVKRTTKETEVEVSVNLDGSGRAKVDTGLPFFDHLLHQFAFHGRIDVEIKARGDLEVDDHHTVEDVGICLGKA LNEALGDREGIRRIAWALVPMDEALVECAVDISGRPYFVLKGYRPRRNRIGSPPLSTENVSHFWKSFCDHAGVTMHVVVR WWDNDHHAIEAMFKAVGRALGAAKEIVGDGVPSTKGTLRRG
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=50, Blast_Score=181, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324776, Length=219, Percent_Identity=37.4429223744292, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_METKA (P58879)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614138.1 - ProteinModelPortal: P58879 - SMR: P58879 - GeneID: 1476956 - GenomeReviews: AE009439_GR - KEGG: mka:MK0855 - NMPDR: fig|190192.1.peg.851 - HOGENOM: HBG289010 - OMA: TLHVETL - BioCyc: MKAN190192:MK0855-MONOMER - BRENDA: 4.2.1.19 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22293; Mature: 22293
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVRTADVKRTTKETEVEVSVNLDGSGRAKVDTGLPFFDHLLHQFAFHGRIDVEIKARG CCCCCCCHHHHCCCCCEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEEECC DLEVDDHHTVEDVGICLGKALNEALGDREGIRRIAWALVPMDEALVECAVDISGRPYFVL CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEE KGYRPRRNRIGSPPLSTENVSHFWKSFCDHAGVTMHVVVRWWDNDHHAIEAMFKAVGRAL ECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH GAAKEIVGDGVPSTKGTLRRG HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNSVRTADVKRTTKETEVEVSVNLDGSGRAKVDTGLPFFDHLLHQFAFHGRIDVEIKARG CCCCCCCHHHHCCCCCEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEEECC DLEVDDHHTVEDVGICLGKALNEALGDREGIRRIAWALVPMDEALVECAVDISGRPYFVL CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEE KGYRPRRNRIGSPPLSTENVSHFWKSFCDHAGVTMHVVVRWWDNDHHAIEAMFKAVGRAL ECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH GAAKEIVGDGVPSTKGTLRRG HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014