| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is RPL14A
Identifier: 20094269
GI number: 20094269
Start: 792735
End: 793019
Strand: Reverse
Name: RPL14A
Synonym: MK0833
Alternate gene names: 20094269
Gene position: 793019-792735 (Counterclockwise)
Preceding gene: 20094272
Following gene: 20094268
Centisome position: 46.79
GC content: 60.35
Gene sequence:
>285_bases ATGCCGGCGCCGATCGAGGTGGGAAGGATCTGCGTGAAGACCGCGGGTAGAGAGGCGGGCAAGTACTGTGTCGTCGTGGA CATCGTTGATGAGAATTTCGTGATTATCACAGGACCCAAGGACGTGACCGGTGTCAAGCGTCGTCGCTGTAACATCAAGC ACCTGGAGCCGACACCGGAGAAAGTCGACATCGACCGGGGCGCGTCCGACGAGGAGGTCAAGGAGGCGCTGGAGGAAGCC GGCCTCCTGGACCTCATGAAGGAAGGCATCGTGAGTGGGTCGTGA
Upstream 100 bases:
>100_bases CCGCAGAAGGATAATATTGTTAAGCCGGCGACCAAGGTGACCGCGATCAGCCTCTTCATTACTACTGTCGCCAATCGACG AACTCCCCGGGGTGATCTGC
Downstream 100 bases:
>100_bases GGGGGACCACAGGGTGGCCAAGATCTACGGCGATGAGGACGCCTCCCTCGAACCCCTCGAGGACAAAACGGTGGCGGTAA TCGGGTACGGATCGCAGGGT
Product: 50S ribosomal protein L14e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPAPIEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDIDRGASDEEVKEALEEA GLLDLMKEGIVSGS
Sequences:
>Translated_94_residues MPAPIEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDIDRGASDEEVKEALEEA GLLDLMKEGIVSGS >Mature_93_residues PAPIEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDIDRGASDEEVKEALEEAG LLDLMKEGIVSGS
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L14e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL14E_METKA (Q8TX43)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614116.1 - ProteinModelPortal: Q8TX43 - SMR: Q8TX43 - GeneID: 1476934 - GenomeReviews: AE009439_GR - KEGG: mka:MK0833 - NMPDR: fig|190192.1.peg.829 - HOGENOM: HBG551856 - OMA: HIEPTDK - ProtClustDB: PRK04333 - BioCyc: MKAN190192:MK0833-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00721 - InterPro: IPR005824 - InterPro: IPR002784 - InterPro: IPR014722 - Gene3D: G3DSA:2.30.30.30
Pfam domain/function: PF00467 KOW; PF01929 Ribosomal_L14e
EC number: NA
Molecular weight: Translated: 10206; Mature: 10075
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPIEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPE CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCC KVDIDRGASDEEVKEALEEAGLLDLMKEGIVSGS EEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure PAPIEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPE CCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCC KVDIDRGASDEEVKEALEEAGLLDLMKEGIVSGS EEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014