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The map label for this gene is LldD [H]

Identifier: 20094213

GI number: 20094213

Start: 737872

End: 738996

Strand: Reverse

Name: LldD [H]

Synonym: MK0776

Alternate gene names: 20094213

Gene position: 738996-737872 (Counterclockwise)

Preceding gene: 20094214

Following gene: 20094212

Centisome position: 43.6

GC content: 62.13

Gene sequence:

>1125_bases
TTGGTACGAGGATCACGCGCTGAAGGGATGAGAGAACGGAAGTGGGAACACGTGCTAGCGTGTATTTGGGAGGACGTCGA
ATCGGAGGAAAGCCCGCTGTTCGACTGCGTGAAGATAGTACATCGGGCGCTCCCGGAGCTCGACTTCGACGACGTGGACA
TGGAAATCGAACTCTTCGGGAAGCGGCTCTCCTTCCCGCTGATAATCGCCGGAATGACGGGAGGCCATCCTAAAACCGGC
GAGATCAACCGGAAGCTCGCCCGAGTAGCCCGCGAGCTTGAGATAGGTATAGGGGTCGGAAGCCAGCGAGCCGGCGTGAA
GGATCCGGAGGTGCGGTGGACGTTCGAGGTGGTACGGGAGGAGTACCCCGACGGCCTGGTGCTGGCCAACATCGGGCTCC
CGCAGCTGCGCGAGAACGGCCCAGACCTCGCGCTCGAAGTCGTCGATATGGTGGACGCAGACGCGCTGGCCGTTCACGTG
AACGTGCTGCAGGAAGCGGTTCAGTTGGAAGGTGAGGCGGACGCCGCCGGGTTCGTGGACGTACTCGCCGAAGTCTGCGA
AACGGTGGACGTGCCGGTGGTCTTGAAGGAGACCGGAGCCGGCGTGTCAGCCGAAGACGCCAAGTTGGTCCGGGATATCG
TGGACGGTATCGACGTCGGTGGAGCCGGTGGAACCAACTGGGCGGTGGTCGAAGCCGTCCGGTCGAAGGCCCACGGTGAG
ATACCACTCGGCTACGCGTTCTCCGATTGGGGAGTCCCCACAGCGGCTTCAATACTCGAAGTCAGAAGCGTCGTCGGTAA
CGATCTCGCGATAATTGGAACCGGAGGCGTGCGCACGGGAATGGACGTCGCGAAGGTTCTGGCTCTAGGTGCGGACTGCG
CCGGAATGGCCTTACCAGTGCTCCGTAAAGTGCTGGCCGAGGGCGTCAGAGGCTGCGTCCGCTTCCTGAAGTCGATCGCT
CGCGAGGTCAAGATCGCGATGTTGATGGCGGGGTGTTCGTCCGTGGAGGAAATGAGCAGCGTCCCCATAGTAGTGTACGG
GAAGCTGCGTGAGTGGTTGGAGTGCCGGGGAGTCCCACTCGATCTCGTCTGCACCGGTGATCGCCGAACGGGGTGGAACC
GTTGA

Upstream 100 bases:

>100_bases
CTGCGAAGGGCCGCACGCATAGCGGAGCGCGGCGCGGAAGTGTACATGTTCGATGCTCGGGATCCGGAAAACGTCGACCG
ATTCCTTCGGGGTGAGCACG

Downstream 100 bases:

>100_bases
CCGTCGAGGTGTTCGCAGTAGGGGGATACGGCGAGGCCGGTGGACGAAACATGACCGCGGTCCGCGTGGACGAGGAGATA
GTGATCTTCGACTGTGGTAT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MVRGSRAEGMRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLIIAGMTGGHPKTG
EINRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVLANIGLPQLRENGPDLALEVVDMVDADALAVHV
NVLQEAVQLEGEADAAGFVDVLAEVCETVDVPVVLKETGAGVSAEDAKLVRDIVDGIDVGGAGGTNWAVVEAVRSKAHGE
IPLGYAFSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLAEGVRGCVRFLKSIA
REVKIAMLMAGCSSVEEMSSVPIVVYGKLREWLECRGVPLDLVCTGDRRTGWNR

Sequences:

>Translated_374_residues
MVRGSRAEGMRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLIIAGMTGGHPKTG
EINRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVLANIGLPQLRENGPDLALEVVDMVDADALAVHV
NVLQEAVQLEGEADAAGFVDVLAEVCETVDVPVVLKETGAGVSAEDAKLVRDIVDGIDVGGAGGTNWAVVEAVRSKAHGE
IPLGYAFSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLAEGVRGCVRFLKSIA
REVKIAMLMAGCSSVEEMSSVPIVVYGKLREWLECRGVPLDLVCTGDRRTGWNR
>Mature_374_residues
MVRGSRAEGMRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFGKRLSFPLIIAGMTGGHPKTG
EINRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVREEYPDGLVLANIGLPQLRENGPDLALEVVDMVDADALAVHV
NVLQEAVQLEGEADAAGFVDVLAEVCETVDVPVVLKETGAGVSAEDAKLVRDIVDGIDVGGAGGTNWAVVEAVRSKAHGE
IPLGYAFSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPVLRKVLAEGVRGCVRFLKSIA
REVKIAMLMAGCSSVEEMSSVPIVVYGKLREWLECRGVPLDLVCTGDRRTGWNR

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 40217; Mature: 40217

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGSRAEGMRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHEEHH
KRLSFPLIIAGMTGGHPKTGEINRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVRE
HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
EYPDGLVLANIGLPQLRENGPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVD
HCCCCEEEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
VLAEVCETVDVPVVLKETGAGVSAEDAKLVRDIVDGIDVGGAGGTNWAVVEAVRSKAHGE
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
IPLGYAFSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPV
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH
LRKVLAEGVRGCVRFLKSIAREVKIAMLMAGCSSVEEMSSVPIVVYGKLREWLECRGVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHHHHHHHHHCCCCE
DLVCTGDRRTGWNR
EEEEECCCCCCCCC
>Mature Secondary Structure
MVRGSRAEGMRERKWEHVLACIWEDVESEESPLFDCVKIVHRALPELDFDDVDMEIELFG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHEEHH
KRLSFPLIIAGMTGGHPKTGEINRKLARVARELEIGIGVGSQRAGVKDPEVRWTFEVVRE
HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
EYPDGLVLANIGLPQLRENGPDLALEVVDMVDADALAVHVNVLQEAVQLEGEADAAGFVD
HCCCCEEEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
VLAEVCETVDVPVVLKETGAGVSAEDAKLVRDIVDGIDVGGAGGTNWAVVEAVRSKAHGE
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
IPLGYAFSDWGVPTAASILEVRSVVGNDLAIIGTGGVRTGMDVAKVLALGADCAGMALPV
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHH
LRKVLAEGVRGCVRFLKSIAREVKIAMLMAGCSSVEEMSSVPIVVYGKLREWLECRGVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHHHHHHHHHCCCCE
DLVCTGDRRTGWNR
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]