| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is era [H]
Identifier: 20094209
GI number: 20094209
Start: 734033
End: 734974
Strand: Reverse
Name: era [H]
Synonym: MK0772
Alternate gene names: 20094209
Gene position: 734974-734033 (Counterclockwise)
Preceding gene: 20094210
Following gene: 20094204
Centisome position: 43.36
GC content: 57.43
Gene sequence:
>942_bases GTGGGAATCGAGGTAAAGGAGATCCGGCCCGGCCGCGGACGTCCTGAACTCGTCTACGCCCGAGCAGAACTCGTGGTCCA TAAGGAATCGCTGAAGGCTACCCTCATCGGTCGCGAGGGCAGCACCATCCGAGAGATCGGCAAGCGGGCCCGTGAACTCC TGGAGGAACGCGTCGGAAAGCCTTTCTACCTAGATCTAACCGTCGTAGTCGACCCGAAGAGGTCACCCACTAACCGGTGG TTCAAGGTACGAGACTCTTCGGAAGCCTGGTTGTGCCCCGCCTTCAAACACCCTCACCTCGTGTCCGTGAGGGAATCCAG AATACGCGGCAACGCCCGAGTGGCGGCGTTCGTGGAGCTGGAGCACGTCACAGTCCACGGAGGCGCCATGATCTCGAACT TCTCTTCGATCCGTCGCTCAGTGTTACACAAACGGGTTTCCGTGTCCTCACACTGTGAAATCGAACGCTCGGAACTCGGC CCGGTGACTTTCGTCGGAGATGGAGCAGAGATCCATGGGTGTAAAATCGAGGAGCGGTGTTTCGTGGGCATGAATGCACG CCTCTCGCGCTGTGAAATCGGGAGATGGTCCGTAGTAGGTGCGGGAGCTCACATCAGCGACTCGCGCGTTCCTGAGCGTA GTCTAGTTGTCGGCAACAGCATTGTAGACCGTCTCGACGTTTACACTCTAGTGGTTGGCAAGCGACTCAAACTGGAACTG AACGGTGGCGAAATATGGTCAGGGCAAGGTGAGAAGTACTACGTCTGTTACCTGCCTGAAGACAATAGAATCACAGTCCG TCCTGAACCCACGGAGAGGGTTCTGTGCGAAGTTCGGAAAGCCAACGATAAATGGGAGGTGAGAGGGGAAGGGTTCGTTC GCACGGTCCGAGGGTCGTCGCTACACTGGTACGTGGGACATGAGCGAGGGCTACTGGGTTAG
Upstream 100 bases:
>100_bases AACTACGAGTACTACATCGCACCTACCGAGTGAACGCACCGTCGAGAGAGCCCTGCGCTCGGCCTTACGCGAAGTACTCC ACGGATCACTCCCACGGGAA
Downstream 100 bases:
>100_bases ACCTTCAGAGATTCTCGCAGTTCCTTCACGATCTCCGCGATGTCCATCTTGGTGACCCTGTTCAACACGAACTTAGCGTC TTTCTCCGACTTCGCTAGAT
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGIEVKEIRPGRGRPELVYARAELVVHKESLKATLIGREGSTIREIGKRARELLEERVGKPFYLDLTVVVDPKRSPTNRW FKVRDSSEAWLCPAFKHPHLVSVRESRIRGNARVAAFVELEHVTVHGGAMISNFSSIRRSVLHKRVSVSSHCEIERSELG PVTFVGDGAEIHGCKIEERCFVGMNARLSRCEIGRWSVVGAGAHISDSRVPERSLVVGNSIVDRLDVYTLVVGKRLKLEL NGGEIWSGQGEKYYVCYLPEDNRITVRPEPTERVLCEVRKANDKWEVRGEGFVRTVRGSSLHWYVGHERGLLG
Sequences:
>Translated_313_residues MGIEVKEIRPGRGRPELVYARAELVVHKESLKATLIGREGSTIREIGKRARELLEERVGKPFYLDLTVVVDPKRSPTNRW FKVRDSSEAWLCPAFKHPHLVSVRESRIRGNARVAAFVELEHVTVHGGAMISNFSSIRRSVLHKRVSVSSHCEIERSELG PVTFVGDGAEIHGCKIEERCFVGMNARLSRCEIGRWSVVGAGAHISDSRVPERSLVVGNSIVDRLDVYTLVVGKRLKLEL NGGEIWSGQGEKYYVCYLPEDNRITVRPEPTERVLCEVRKANDKWEVRGEGFVRTVRGSSLHWYVGHERGLLG >Mature_312_residues GIEVKEIRPGRGRPELVYARAELVVHKESLKATLIGREGSTIREIGKRARELLEERVGKPFYLDLTVVVDPKRSPTNRWF KVRDSSEAWLCPAFKHPHLVSVRESRIRGNARVAAFVELEHVTVHGGAMISNFSSIRRSVLHKRVSVSSHCEIERSELGP VTFVGDGAEIHGCKIEERCFVGMNARLSRCEIGRWSVVGAGAHISDSRVPERSLVVGNSIVDRLDVYTLVVGKRLKLELN GGEIWSGQGEKYYVCYLPEDNRITVRPEPTERVLCEVRKANDKWEVRGEGFVRTVRGSSLHWYVGHERGLLG
Specific function: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. The GTPase is stimulated about 6-fo
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005662 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR009019 - InterPro: IPR004044 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07650 KH_2; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 35284; Mature: 35153
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEVKEIRPGRGRPELVYARAELVVHKESLKATLIGREGSTIREIGKRARELLEERVGK CCCEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC PFYLDLTVVVDPKRSPTNRWFKVRDSSEAWLCPAFKHPHLVSVRESRIRGNARVAAFVEL CEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEEEE EHVTVHGGAMISNFSSIRRSVLHKRVSVSSHCEIERSELGPVTFVGDGAEIHGCKIEERC EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEEECCCEEECEEECCEE FVGMNARLSRCEIGRWSVVGAGAHISDSRVPERSLVVGNSIVDRLDVYTLVVGKRLKLEL EECCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHEEEEECCEEEEEE NGGEIWSGQGEKYYVCYLPEDNRITVRPEPTERVLCEVRKANDKWEVRGEGFVRTVRGSS CCCEEECCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCE LHWYVGHERGLLG EEEEECCCCCCCC >Mature Secondary Structure GIEVKEIRPGRGRPELVYARAELVVHKESLKATLIGREGSTIREIGKRARELLEERVGK CCEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC PFYLDLTVVVDPKRSPTNRWFKVRDSSEAWLCPAFKHPHLVSVRESRIRGNARVAAFVEL CEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEHHHHCCCCCEEEEEEEE EHVTVHGGAMISNFSSIRRSVLHKRVSVSSHCEIERSELGPVTFVGDGAEIHGCKIEERC EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEEECCCEEECEEECCEE FVGMNARLSRCEIGRWSVVGAGAHISDSRVPERSLVVGNSIVDRLDVYTLVVGKRLKLEL EECCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHEEEEECCEEEEEE NGGEIWSGQGEKYYVCYLPEDNRITVRPEPTERVLCEVRKANDKWEVRGEGFVRTVRGSS CCCEEECCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCE LHWYVGHERGLLG EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]