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The map label for this gene is FlpD_2 [H]

Identifier: 20094065

GI number: 20094065

Start: 589834

End: 590232

Strand: Reverse

Name: FlpD_2 [H]

Synonym: MK0627

Alternate gene names: 20094065

Gene position: 590232-589834 (Counterclockwise)

Preceding gene: 20094067

Following gene: 20094060

Centisome position: 34.82

GC content: 64.66

Gene sequence:

>399_bases
ATGTCCGAGGAGTCGGTCGTCGTGGCCTTCTGCTGTTACGAGTGAGGCTACGGTGCGGCGGACCTAGCGGGTACCGGAAG
GGCCCAGTACCCCAGCAGCGTCAGGATCGTGAGGGTACCGTGCACGGGCCGCGTCGGCATCGAACACATCCTGACGGCGC
TCGCCAAGGGCGCGTGGACGGTTTTCGTCGCCGGATGAAAGAAGGGAGAGTGCAGCTACGAGGACGGTAATCTCAAGTGC
GAGCGCCGGGTGCAGGCGGCCAAGAAGCTGCTAGAGGAGCTCGGCATCGAGCCGGAGCGCGTCGAGATATACTTCATGTC
CTCCGCGGAAGCCGACAAGTTCGTCGCCGCCGTCAAGGAGATGCACGAGCGGGCGAAGGAACTGGGCCCGCTCGCCTGA

Upstream 100 bases:

>100_bases
CCCTCCAGCTCGACCCTCTTCACGTGGATCTCCCCGATCGACCCCTCGGGATGGTAACCGATTTAAAACGGACGGAGCGG
TGCACGATCGGGTGATGACC

Downstream 100 bases:

>100_bases
ACGTGCCGGCGGGATGACGCCCGGGGGGAACCCCGCAAGGAGGGGACCCCCGGGTCCGAGCCGCCGTCGGAGGAACGTTA
TCACTCCCATAACGATTCCC

Product: coenzyme F420-reducing hydrogenase, delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSEESVVVAFCCYEUGYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTVFVAGUKKGECSYEDGNLKC
ERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMHERAKELGPLA

Sequences:

>Translated_132_residues
MSEESVVVAFCCYE*GYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTVFVAG*KKGECSYEDGNLKC
ERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMHERAKELGPLA
>Mature_131_residues
SEESVVVAFCCYE*GYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTVFVAG*KKGECSYEDGNLKCE
RRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMHERAKELGPLA

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 14109; Mature: 13978

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEESVVVAFCCYEGYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTV
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEE
FVAGKKGECSYEDGNLKCERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMH
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH
ERAKELGPLA
HHHHHCCCCC
>Mature Secondary Structure 
SEESVVVAFCCYEGYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTV
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEE
FVAGKKGECSYEDGNLKCERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMH
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH
ERAKELGPLA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]