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The map label for this gene is 20093994

Identifier: 20093994

GI number: 20093994

Start: 519350

End: 520219

Strand: Reverse

Name: 20093994

Synonym: MK0556

Alternate gene names: NA

Gene position: 520219-519350 (Counterclockwise)

Preceding gene: 20093995

Following gene: 20093992

Centisome position: 30.69

GC content: 62.64

Gene sequence:

>870_bases
TTGACCGACCGTATTGAGACTCGCATACCGGGTTTCGACGAGATGATCGGCGGCGGACTCCCCAGACGTGGTGTGACGGT
ACTCGCGGGTCTTCCCGGGTCCGCCCGGCAGCCCCTGCTCGACAACGCGGTCTGGAACGTCCTGGAGGACGGTTTCCGTG
TACTCCTCCTCGCCACCAGCACCTCGCCCTACGAGTTCCTACGACGTTCCGAGGAGTACGATAGGAGAGCCCGCGAAGCC
TACGAGAAAGGCGATCTGGTCGTCCTCAACGCCTTCAGCGTCCGTGCCGGTATCTACCATCGGACCGTAGGCGAGATCAT
CCAGGACCTCGAGCCCCACAGGATCCGAGAACTCGTCCCCGAATACGACCCCGACGTCGTCGTGATCGACTCGATATACC
CGATGCACCGTGGCGAACACGAGAAGTTCCTGCAGGTAATCTCCACCCTGAAGGTAGCCGCCGTGAGGAACGACCTCGCG
GTCCTCGCCGGATGCGCCCTACCGGAGTCCGCTTTACGATCGCCGAACGCCGAGGTCGCCGACGTCCTGCTGGAGACCGC
AGTACACGAGTTCCGTGGCGCCCTGGTGTACAGTCTCCTCCCTATCCGTACCCTGCCTCCACACCTCCCCAAGTACCGGG
CACCGGTGAGCATCCTCGACGACGGGACCGTCGTCGTGCACTGCGACAAGGTCCTCGACGTGAAGGCCGGCGAGATCCGC
GACGTCGACGAGTACCTTAACGACGTCCTCAACATGCCCGAATCCATGGCCCGTGAAGTCGCCGAAGACTCCGAGGTGCT
GGGGGAGCTGGAGGAGGAGCGCGACGACATCGAAAAGTTGCTCGAAGAGCTCGAAGAGATGGAAGGATGA

Upstream 100 bases:

>100_bases
AGGCTCCGGACACGTCTCGAAAAGCTGGGAGTCCTATCGTACCACTCCGCATATCGAGGGTTTTACGAAGTCCACGTCCC
GAAGTTCGAGGGCGTCCACC

Downstream 100 bases:

>100_bases
GGACACGGCCACGGGAGCGACCGCCACGGGATGATCGGAATCCGCCCACCCGACCCTCCTCCGAAAGGGTCCGGGATGAT
GGCGGGATTAGCCCCAAACG

Product: signal transduction ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTDRIETRIPGFDEMIGGGLPRRGVTVLAGLPGSARQPLLDNAVWNVLEDGFRVLLLATSTSPYEFLRRSEEYDRRAREA
YEKGDLVVLNAFSVRAGIYHRTVGEIIQDLEPHRIRELVPEYDPDVVVIDSIYPMHRGEHEKFLQVISTLKVAAVRNDLA
VLAGCALPESALRSPNAEVADVLLETAVHEFRGALVYSLLPIRTLPPHLPKYRAPVSILDDGTVVVHCDKVLDVKAGEIR
DVDEYLNDVLNMPESMAREVAEDSEVLGELEEERDDIEKLLEELEEMEG

Sequences:

>Translated_289_residues
MTDRIETRIPGFDEMIGGGLPRRGVTVLAGLPGSARQPLLDNAVWNVLEDGFRVLLLATSTSPYEFLRRSEEYDRRAREA
YEKGDLVVLNAFSVRAGIYHRTVGEIIQDLEPHRIRELVPEYDPDVVVIDSIYPMHRGEHEKFLQVISTLKVAAVRNDLA
VLAGCALPESALRSPNAEVADVLLETAVHEFRGALVYSLLPIRTLPPHLPKYRAPVSILDDGTVVVHCDKVLDVKAGEIR
DVDEYLNDVLNMPESMAREVAEDSEVLGELEEERDDIEKLLEELEEMEG
>Mature_288_residues
TDRIETRIPGFDEMIGGGLPRRGVTVLAGLPGSARQPLLDNAVWNVLEDGFRVLLLATSTSPYEFLRRSEEYDRRAREAY
EKGDLVVLNAFSVRAGIYHRTVGEIIQDLEPHRIRELVPEYDPDVVVIDSIYPMHRGEHEKFLQVISTLKVAAVRNDLAV
LAGCALPESALRSPNAEVADVLLETAVHEFRGALVYSLLPIRTLPPHLPKYRAPVSILDDGTVVVHCDKVLDVKAGEIRD
VDEYLNDVLNMPESMAREVAEDSEVLGELEEERDDIEKLLEELEEMEG

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 32376; Mature: 32245

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRIETRIPGFDEMIGGGLPRRGVTVLAGLPGSARQPLLDNAVWNVLEDGFRVLLLATS
CCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
TSPYEFLRRSEEYDRRAREAYEKGDLVVLNAFSVRAGIYHRTVGEIIQDLEPHRIRELVP
CCHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
EYDPDVVVIDSIYPMHRGEHEKFLQVISTLKVAAVRNDLAVLAGCALPESALRSPNAEVA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHH
DVLLETAVHEFRGALVYSLLPIRTLPPHLPKYRAPVSILDDGTVVVHCDKVLDVKAGEIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCHHCCCCCCCC
DVDEYLNDVLNMPESMAREVAEDSEVLGELEEERDDIEKLLEELEEMEG
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDRIETRIPGFDEMIGGGLPRRGVTVLAGLPGSARQPLLDNAVWNVLEDGFRVLLLATS
CCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
TSPYEFLRRSEEYDRRAREAYEKGDLVVLNAFSVRAGIYHRTVGEIIQDLEPHRIRELVP
CCHHHHHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
EYDPDVVVIDSIYPMHRGEHEKFLQVISTLKVAAVRNDLAVLAGCALPESALRSPNAEVA
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHH
DVLLETAVHEFRGALVYSLLPIRTLPPHLPKYRAPVSILDDGTVVVHCDKVLDVKAGEIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCHHCCCCCCCC
DVDEYLNDVLNMPESMAREVAEDSEVLGELEEERDDIEKLLEELEEMEG
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]