Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093892

Identifier: 20093892

GI number: 20093892

Start: 423263

End: 423655

Strand: Reverse

Name: 20093892

Synonym: MK0454

Alternate gene names: NA

Gene position: 423655-423263 (Counterclockwise)

Preceding gene: 20093895

Following gene: 20093891

Centisome position: 24.99

GC content: 52.93

Gene sequence:

>393_bases
TTGTTCGTGGTGATCAGGTCGGATTCTTACGAGAAGATACTCACAAGCTTGTCGGATATCGAGAGGTACGCGGGTATTAA
AATCTTGGGCAAACCGAGAATTATGGATCCGGAGGTCGCTGACACGATAGTACGGGAGCTTTTGGGTGAGGTGCGGAGAA
GGTATCCAGTGGCCGCGGTCGCTCGTGTAGAAGGTGAACCGGCCGAAGTTATTCGGAAGATCTCTGAAATCCATCCCCCG
GCCCATTTGATCGTTATAACCCCAAGGCACGGTGACGTGTACAGGGGAATAGCCCGCAGGTTCGGAAAGCTCGAGGAGCT
TCGCGGATACCACTCGCCTAAGCGGAGGATCGAAGATGATAGGGAAAAGGAAGGTAGAGAGACTGCTCGATGA

Upstream 100 bases:

>100_bases
GTCCTCCTCCGCGTGTCGGCCCGAGACGTCGACACCGACGATATTCACCCTGACGCCCAGGTTAAACCCCCCAGCATCGG
GAGAGCGAGGGGACCGAAGC

Downstream 100 bases:

>100_bases
GTTCCCGAACGAGGTGGAGTATCACCGGAGCGACGACCACGTGGTGACGTGTCCAACGGAGCTATACCTCGTACCGACAC
CCATCGAGATCGTGGTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MFVVIRSDSYEKILTSLSDIERYAGIKILGKPRIMDPEVADTIVRELLGEVRRRYPVAAVARVEGEPAEVIRKISEIHPP
AHLIVITPRHGDVYRGIARRFGKLEELRGYHSPKRRIEDDREKEGRETAR

Sequences:

>Translated_130_residues
MFVVIRSDSYEKILTSLSDIERYAGIKILGKPRIMDPEVADTIVRELLGEVRRRYPVAAVARVEGEPAEVIRKISEIHPP
AHLIVITPRHGDVYRGIARRFGKLEELRGYHSPKRRIEDDREKEGRETAR
>Mature_130_residues
MFVVIRSDSYEKILTSLSDIERYAGIKILGKPRIMDPEVADTIVRELLGEVRRRYPVAAVARVEGEPAEVIRKISEIHPP
AHLIVITPRHGDVYRGIARRFGKLEELRGYHSPKRRIEDDREKEGRETAR

Specific function: Unknown

COG id: COG1844

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR007154 [H]

Pfam domain/function: PF04009 DUF356 [H]

EC number: NA

Molecular weight: Translated: 14984; Mature: 14984

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVVIRSDSYEKILTSLSDIERYAGIKILGKPRIMDPEVADTIVRELLGEVRRRYPVAAV
CEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
ARVEGEPAEVIRKISEIHPPAHLIVITPRHGDVYRGIARRFGKLEELRGYHSPKRRIEDD
HHCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
REKEGRETAR
HHHCCCCCCC
>Mature Secondary Structure
MFVVIRSDSYEKILTSLSDIERYAGIKILGKPRIMDPEVADTIVRELLGEVRRRYPVAAV
CEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
ARVEGEPAEVIRKISEIHPPAHLIVITPRHGDVYRGIARRFGKLEELRGYHSPKRRIEDD
HHCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCH
REKEGRETAR
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]