| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is yjhP [C]
Identifier: 20093891
GI number: 20093891
Start: 422752
End: 423300
Strand: Reverse
Name: yjhP [C]
Synonym: MK0453
Alternate gene names: 20093891
Gene position: 423300-422752 (Counterclockwise)
Preceding gene: 20093892
Following gene: 20093890
Centisome position: 24.97
GC content: 53.73
Gene sequence:
>549_bases ATGATAGGGAAAAGGAAGGTAGAGAGACTGCTCGATGAGTTCCCGAACGAGGTGGAGTATCACCGGAGCGACGACCACGT GGTGACGTGTCCAACGGAGCTATACCTCGTACCGACACCCATCGAGATCGTGGTTGAGATCCTTCGAAAGCTGGAGTTAA CTCCTAAAAATAGAGTGGTGGATCTGGGCTGCGGAGACGGTCGCTTCGTGATCTCGGCCGCCTACCTGTATGGGTGTGAA GGGATGGGGGTGGACGTACGGGAGGATGTGCTCGAGTTAGCCCGCGCAAAATCCGAAACACTTAGAGTAGACGATAAAAC CATCTTTATACATTCTGACGTCCGGGACATCGACCTGCGGGAGTTAAATCCGGACGTCGTATTCGTGTATTTAATGCCGT CTCTCCTCGAGGAAATATCAGAGGAGCTGGTATCGTGCGGAGCTACCGTCGTGAGCTATACCTTCGAGGTTCCGGGGTTA GGCGTACCGGAGGTGCTGCGACTGGACGATTTACGACGCGCTTACGTGTACAGGGGAGTCTCACATTGA
Upstream 100 bases:
>100_bases ATAACCCCAAGGCACGGTGACGTGTACAGGGGAATAGCCCGCAGGTTCGGAAAGCTCGAGGAGCTTCGCGGATACCACTC GCCTAAGCGGAGGATCGAAG
Downstream 100 bases:
>100_bases ACCTCGTAGCTGAGGCCGTCAGAAGGTTCAAGTCGGTTGATCTAATACGTTCTCAAATCCTCGGCCTTAAGGGGTTACTG CCGCGGAAGGATCGGGCGGT
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL GVPEVLRLDDLRRAYVYRGVSH
Sequences:
>Translated_182_residues MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL GVPEVLRLDDLRRAYVYRGVSH >Mature_182_residues MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL GVPEVLRLDDLRRAYVYRGVSH
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20654; Mature: 20654
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVV CCCHHHHHHHHHHCCCHHCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEE DLGCGDGRFVISAAYLYGCEGMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLR EECCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHH ELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGLGVPEVLRLDDLRRAYVYRGV HCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC SH CC >Mature Secondary Structure MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVV CCCHHHHHHHHHHCCCHHCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEE DLGCGDGRFVISAAYLYGCEGMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLR EECCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHH ELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGLGVPEVLRLDDLRRAYVYRGV HCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC SH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA