Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093876

Identifier: 20093876

GI number: 20093876

Start: 409120

End: 409710

Strand: Reverse

Name: 20093876

Synonym: MK0438

Alternate gene names: NA

Gene position: 409710-409120 (Counterclockwise)

Preceding gene: 20093877

Following gene: 20093875

Centisome position: 24.17

GC content: 57.7

Gene sequence:

>591_bases
CTGCCCTTTCCGATGGAGCGGTTCATGCTCTCCATTACCCTATGGAACACTATGACGATACTCATAACCACCTTCGGTGG
CCTGATAGCGCTGACCCTGGACCGACTGGTGACGAGGTACGCTCCCGACGTCCTCCGCAGAAGCATGAACAATCCTCCGT
ACGCCCCGATTCTCGTGAAGCTAGCTCGTAAGCTCGGGTTCGACGTACGGCGGTACAAAGAGGCCGACGTGATACTGACG
TTGAAGCTCGGACCGCTGCTGATCCCAGCGATCAACGGGTTCGCCGCTGGGGCCTTCGGGATGTGGGTACTGCAGAACTT
CGGTCCGGTCTTCCTGCTGGGTGCGGCTTTACTACCTCACGGGGTAATCGAGTTCCCGACACTAATCATCGCGGGAGCCA
TGGGCGTGCATCTGGCCGATTACCTGATCTACAGAGTCCGACTCCATGAGCGGTGGCCTCATGGGAACTTGGAGGTACCG
AGTTGGGTAATCCGTAACACGGCCGCCTGTATCGCAGGCCTGACCGTCGCCGCGTACTTAGAAGTTCATATAACACCGAT
AGTGGCAGGGTGTGTGATGAAGTGCGCTTGA

Upstream 100 bases:

>100_bases
TTCAGGGTTCCTGGGGATGATCGCGTACTTCATGTTCCCCTCTCTCCCGGACATTATCCTTAAAACGACGTGTCAGAAGG
TAGAGGCCCTCGCACGCCTT

Downstream 100 bases:

>100_bases
CTGTAAGGGAGCTAGATATAGACAGGTCTCCCGACGAGGTCTACGCGGCCTTGAGGACGCTGTCCTCACACACGTTCCTA
TTCGAGTCGGCCGAGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILT
LKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVP
SWVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA

Sequences:

>Translated_196_residues
MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILT
LKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVP
SWVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA
>Mature_195_residues
PFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILTL
KLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPS
WVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA

Specific function: Unknown

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21651; Mature: 21520

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH
LARKLGFDVRRYKEADVILTLKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPH
HHHHHCCHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
GVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPSWVIRNTAACIAGLTVAAYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EVHITPIVAGCVMKCA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH
LARKLGFDVRRYKEADVILTLKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPH
HHHHHCCHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
GVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPSWVIRNTAACIAGLTVAAYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EVHITPIVAGCVMKCA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA