| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093876
Identifier: 20093876
GI number: 20093876
Start: 409120
End: 409710
Strand: Reverse
Name: 20093876
Synonym: MK0438
Alternate gene names: NA
Gene position: 409710-409120 (Counterclockwise)
Preceding gene: 20093877
Following gene: 20093875
Centisome position: 24.17
GC content: 57.7
Gene sequence:
>591_bases CTGCCCTTTCCGATGGAGCGGTTCATGCTCTCCATTACCCTATGGAACACTATGACGATACTCATAACCACCTTCGGTGG CCTGATAGCGCTGACCCTGGACCGACTGGTGACGAGGTACGCTCCCGACGTCCTCCGCAGAAGCATGAACAATCCTCCGT ACGCCCCGATTCTCGTGAAGCTAGCTCGTAAGCTCGGGTTCGACGTACGGCGGTACAAAGAGGCCGACGTGATACTGACG TTGAAGCTCGGACCGCTGCTGATCCCAGCGATCAACGGGTTCGCCGCTGGGGCCTTCGGGATGTGGGTACTGCAGAACTT CGGTCCGGTCTTCCTGCTGGGTGCGGCTTTACTACCTCACGGGGTAATCGAGTTCCCGACACTAATCATCGCGGGAGCCA TGGGCGTGCATCTGGCCGATTACCTGATCTACAGAGTCCGACTCCATGAGCGGTGGCCTCATGGGAACTTGGAGGTACCG AGTTGGGTAATCCGTAACACGGCCGCCTGTATCGCAGGCCTGACCGTCGCCGCGTACTTAGAAGTTCATATAACACCGAT AGTGGCAGGGTGTGTGATGAAGTGCGCTTGA
Upstream 100 bases:
>100_bases TTCAGGGTTCCTGGGGATGATCGCGTACTTCATGTTCCCCTCTCTCCCGGACATTATCCTTAAAACGACGTGTCAGAAGG TAGAGGCCCTCGCACGCCTT
Downstream 100 bases:
>100_bases CTGTAAGGGAGCTAGATATAGACAGGTCTCCCGACGAGGTCTACGCGGCCTTGAGGACGCTGTCCTCACACACGTTCCTA TTCGAGTCGGCCGAGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILT LKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVP SWVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA
Sequences:
>Translated_196_residues MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILT LKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVP SWVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA >Mature_195_residues PFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVKLARKLGFDVRRYKEADVILTL KLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPHGVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPS WVIRNTAACIAGLTVAAYLEVHITPIVAGCVMKCA
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21651; Mature: 21520
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH LARKLGFDVRRYKEADVILTLKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPH HHHHHCCHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCC GVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPSWVIRNTAACIAGLTVAAYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EVHITPIVAGCVMKCA HHHHHHHHHHHHHHCC >Mature Secondary Structure PFPMERFMLSITLWNTMTILITTFGGLIALTLDRLVTRYAPDVLRRSMNNPPYAPILVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH LARKLGFDVRRYKEADVILTLKLGPLLIPAINGFAAGAFGMWVLQNFGPVFLLGAALLPH HHHHHCCHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCC GVIEFPTLIIAGAMGVHLADYLIYRVRLHERWPHGNLEVPSWVIRNTAACIAGLTVAAYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EVHITPIVAGCVMKCA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA