| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is TrpE [H]
Identifier: 20093875
GI number: 20093875
Start: 407723
End: 409129
Strand: Reverse
Name: TrpE [H]
Synonym: MK0437
Alternate gene names: 20093875
Gene position: 409129-407723 (Counterclockwise)
Preceding gene: 20093876
Following gene: 20093874
Centisome position: 24.14
GC content: 60.7
Gene sequence:
>1407_bases GTGCGCTTGACTGTAAGGGAGCTAGATATAGACAGGTCTCCCGACGAGGTCTACGCGGCCTTGAGGACGCTGTCCTCACA CACGTTCCTATTCGAGTCGGCCGAGATCGGTGCCAGCGGCCGGTACTCCTTCGTAGGCTTCTCACCGGCGCTTAGGATAG AGTGCGTCGACGGTCGAGTCCGCGTGGACGTCGGTGACCCGGAGTACGCCGATTTAGTGGTTGAAGGTCGAAAGGAAACG GATGAGGACCACTTCCAGCTCATGCGCCGCGTGTTCTCCCGAATCCCGAAGGTCGAGGGGTCCGGCTTCGTCGGCGGTCT CGTGGGCTACATATCGTACGACGTCGTCGAAGACTGGCTGGACGTCAAATCGACCACCGTCGCCGACCCGGAGTGGCCGT CCTTCGAGCTGTGCCTCTACGACTCGGTGGTGCGCTTCGACCACTACGAGGACAGAGTCGAGCTGATCTCCGTCCATCCC GACGACTACGAGGTCGAGTGGACGGCGGAGGCGATCGAGGAGTGTGTCCGAGAGGTGAGCGGACAGACGGCCCCTAAGGT GCACCGGACGGGGGAGCTGAAGCGGGACCTGGAGAAAGAGGAGTTCGAGGGGATCGTCGAGCGGGCGAAGGAGTACATAA TCTCGGGGGACATCTTCCAGGTTGTACTCTCGAGGCGGGTGGAGGTGCGAGCGGTCGCGGATCCGCTCGAGGTGTACCGA AGGCTCCGCGACATCAACCCGTCCCCGTACATGTACTGCTTGGAGTTCGGCGAGCGGAGGATCATCGGGTCCAGTCCCGA GACGCTCGTCCGGCTGGAAGGTGATCGCATCATCACGAAACCCATAGCCGGCACCAGGCCCCGTGGTAGTACCCCAGAAG AGGACGAAGAGCTGGCCCGTGAGATGCTCGAAGATGAGAAAGAGCTCGCGGAGCACGCGATGCTCGTGGATCTCGCCAGA AACGACGTGGGTAAGGTCTCGAGACCCGGAACGGTCGAAGTCACGCGGCTCATGGAGATCGAGAAGTACAGTCACGTGCA GCACATCGTGTCCGAGGTGGTGGGTGAGAGAAAGGAGGGAGTTACCCCCTGGGACGTACTCCGGGCGACGTTCCCGGCCG GAACCGTCTCCGGGGCCCCGAAGGTGAGGGCTATGGAAATCATCGACGAGCTGGAGGTGTACAAGCGAGGCCCGTACGCC GGAGGCGTCGGATACGTCAGCTGGACAGGGGATATGGACTTCGCGATATCGATCCGTACCATTTTCTCGACGGGCCGTCG ATGGTTCACGCAGGCGGGTGCCGGTATCGTGTACGACTCGGTGCCCGAAAACGAGTGGTTCGAAACTGAAAATAAAATGA AAGCGATGGTGGGAGCTATCCTTGAGGAGACTAGTTCTGATAAATAA
Upstream 100 bases:
>100_bases GTTGGGTAATCCGTAACACGGCCGCCTGTATCGCAGGCCTGACCGTCGCCGCGTACTTAGAAGTTCATATAACACCGATA GTGGCAGGGTGTGTGATGAA
Downstream 100 bases:
>100_bases CAAGGATAGTTTCGTGTATAATCTCTACCATTTGTTCGCCTCATATGATCTCGATTTGAAAGTTGTCTCCAACAAGGTTC CGCTCTCCAGGCTCGAGCGG
Product: anthranilate/para-aminobenzoate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I 2 [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MRLTVRELDIDRSPDEVYAALRTLSSHTFLFESAEIGASGRYSFVGFSPALRIECVDGRVRVDVGDPEYADLVVEGRKET DEDHFQLMRRVFSRIPKVEGSGFVGGLVGYISYDVVEDWLDVKSTTVADPEWPSFELCLYDSVVRFDHYEDRVELISVHP DDYEVEWTAEAIEECVREVSGQTAPKVHRTGELKRDLEKEEFEGIVERAKEYIISGDIFQVVLSRRVEVRAVADPLEVYR RLRDINPSPYMYCLEFGERRIIGSSPETLVRLEGDRIITKPIAGTRPRGSTPEEDEELAREMLEDEKELAEHAMLVDLAR NDVGKVSRPGTVEVTRLMEIEKYSHVQHIVSEVVGERKEGVTPWDVLRATFPAGTVSGAPKVRAMEIIDELEVYKRGPYA GGVGYVSWTGDMDFAISIRTIFSTGRRWFTQAGAGIVYDSVPENEWFETENKMKAMVGAILEETSSDK
Sequences:
>Translated_468_residues MRLTVRELDIDRSPDEVYAALRTLSSHTFLFESAEIGASGRYSFVGFSPALRIECVDGRVRVDVGDPEYADLVVEGRKET DEDHFQLMRRVFSRIPKVEGSGFVGGLVGYISYDVVEDWLDVKSTTVADPEWPSFELCLYDSVVRFDHYEDRVELISVHP DDYEVEWTAEAIEECVREVSGQTAPKVHRTGELKRDLEKEEFEGIVERAKEYIISGDIFQVVLSRRVEVRAVADPLEVYR RLRDINPSPYMYCLEFGERRIIGSSPETLVRLEGDRIITKPIAGTRPRGSTPEEDEELAREMLEDEKELAEHAMLVDLAR NDVGKVSRPGTVEVTRLMEIEKYSHVQHIVSEVVGERKEGVTPWDVLRATFPAGTVSGAPKVRAMEIIDELEVYKRGPYA GGVGYVSWTGDMDFAISIRTIFSTGRRWFTQAGAGIVYDSVPENEWFETENKMKAMVGAILEETSSDK >Mature_468_residues MRLTVRELDIDRSPDEVYAALRTLSSHTFLFESAEIGASGRYSFVGFSPALRIECVDGRVRVDVGDPEYADLVVEGRKET DEDHFQLMRRVFSRIPKVEGSGFVGGLVGYISYDVVEDWLDVKSTTVADPEWPSFELCLYDSVVRFDHYEDRVELISVHP DDYEVEWTAEAIEECVREVSGQTAPKVHRTGELKRDLEKEEFEGIVERAKEYIISGDIFQVVLSRRVEVRAVADPLEVYR RLRDINPSPYMYCLEFGERRIIGSSPETLVRLEGDRIITKPIAGTRPRGSTPEEDEELAREMLEDEKELAEHAMLVDLAR NDVGKVSRPGTVEVTRLMEIEKYSHVQHIVSEVVGERKEGVTPWDVLRATFPAGTVSGAPKVRAMEIIDELEVYKRGPYA GGVGYVSWTGDMDFAISIRTIFSTGRRWFTQAGAGIVYDSVPENEWFETENKMKAMVGAILEETSSDK
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=395, Percent_Identity=37.4683544303797, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1788114, Length=392, Percent_Identity=32.6530612244898, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI87082077, Length=283, Percent_Identity=26.1484098939929, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1786809, Length=264, Percent_Identity=28.4090909090909, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320935, Length=478, Percent_Identity=38.2845188284519, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6324361, Length=400, Percent_Identity=24, Blast_Score=113, Evalue=5e-26,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR010116 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 53030; Mature: 53030
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTVRELDIDRSPDEVYAALRTLSSHTFLFESAEIGASGRYSFVGFSPALRIECVDGRV CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCEE RVDVGDPEYADLVVEGRKETDEDHFQLMRRVFSRIPKVEGSGFVGGLVGYISYDVVEDWL EEECCCCCHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DVKSTTVADPEWPSFELCLYDSVVRFDHYEDRVELISVHPDDYEVEWTAEAIEECVREVS HCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHC GQTAPKVHRTGELKRDLEKEEFEGIVERAKEYIISGDIFQVVLSRRVEVRAVADPLEVYR CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH RLRDINPSPYMYCLEFGERRIIGSSPETLVRLEGDRIITKPIAGTRPRGSTPEEDEELAR HHHCCCCCCEEEEEECCCCEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHH EMLEDEKELAEHAMLVDLARNDVGKVSRPGTVEVTRLMEIEKYSHVQHIVSEVVGERKEG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC VTPWDVLRATFPAGTVSGAPKVRAMEIIDELEVYKRGPYAGGVGYVSWTGDMDFAISIRT CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHHH IFSTGRRWFTQAGAGIVYDSVPENEWFETENKMKAMVGAILEETSSDK HHHCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLTVRELDIDRSPDEVYAALRTLSSHTFLFESAEIGASGRYSFVGFSPALRIECVDGRV CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCEE RVDVGDPEYADLVVEGRKETDEDHFQLMRRVFSRIPKVEGSGFVGGLVGYISYDVVEDWL EEECCCCCHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH DVKSTTVADPEWPSFELCLYDSVVRFDHYEDRVELISVHPDDYEVEWTAEAIEECVREVS HCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHC GQTAPKVHRTGELKRDLEKEEFEGIVERAKEYIISGDIFQVVLSRRVEVRAVADPLEVYR CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH RLRDINPSPYMYCLEFGERRIIGSSPETLVRLEGDRIITKPIAGTRPRGSTPEEDEELAR HHHCCCCCCEEEEEECCCCEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHH EMLEDEKELAEHAMLVDLARNDVGKVSRPGTVEVTRLMEIEKYSHVQHIVSEVVGERKEG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC VTPWDVLRATFPAGTVSGAPKVRAMEIIDELEVYKRGPYAGGVGYVSWTGDMDFAISIRT CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHHH IFSTGRRWFTQAGAGIVYDSVPENEWFETENKMKAMVGAILEETSSDK HHHCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA