| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093848
Identifier: 20093848
GI number: 20093848
Start: 389846
End: 390271
Strand: Direct
Name: 20093848
Synonym: MK0410
Alternate gene names: NA
Gene position: 389846-390271 (Clockwise)
Preceding gene: 20093846
Following gene: 20093849
Centisome position: 23.0
GC content: 59.15
Gene sequence:
>426_bases TTGCTCGTCGTCTCCCTGGGGTGTCCGAAGATCCCACCGAAGATCTCCTCCGCGATTTACGCGTGCTACCGGTATGACGA TAGAGCGTTAGTACTCAGCACCGAGGCGGGATGTAAGCTCCTCGAGTACGCCGACCCTGAGAAGGAGTACGTGGATGAAA CTCGAACGTACGAGAAATACCTAGAGGACCCGGATGCCGCCGGTATCCTGCTCGCGTTCGTGACGAACGATACGGAATTA CAGATAGCGGTCACCCTGAAGGAGGTATCGGAACCCGACGACGCGAGGGCGGTATGTACCGAGGAGTTCGAGGATCGGCT CGAGGACTGCGGGTTCCTTACCGCACCGGTAACTGGTCGGCGGTGGAAGCACGACCCGAAGAGATGGGTTAAGGCGGTCG AGGACGTGCTGGGGGCGAGTCGATGA
Upstream 100 bases:
>100_bases CCAATCGAGCCCGCCGCGTGAGAGTACACTCACGACCGCGCCGAGCTCGAGCTCCTCAAACCCGTCGTCCACCAGCACCG CGATCAAGGGGGAACCTCCC
Downstream 100 bases:
>100_bases CGTTCTGCCTCGAGGAGCGGGAGTACGAGATACTAATGGCGAGAAGGCCGTTCGACGACTGTGCGAGATACATCGAATCG AAGTTTGGAAACATCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR
Sequences:
>Translated_141_residues MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR >Mature_141_residues MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR
Specific function: Unknown
COG id: COG4081
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15879; Mature: 15879
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKY CEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHH LEDPDAAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGR HCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCC RWKHDPKRWVKAVEDVLGASR CCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKY CEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHH LEDPDAAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGR HCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCC RWKHDPKRWVKAVEDVLGASR CCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA