Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093846

Identifier: 20093846

GI number: 20093846

Start: 388923

End: 389306

Strand: Direct

Name: 20093846

Synonym: MK0408

Alternate gene names: NA

Gene position: 388923-389306 (Clockwise)

Preceding gene: 20093844

Following gene: 20093848

Centisome position: 22.95

GC content: 56.77

Gene sequence:

>384_bases
GTGAATCCGGCACCTTCCGAGCTGCGGTTCGGCGCCTACGCTATTGACTGCGTGATCACGGCCGTGATGTCATTGTTAAT
ATGTCTGGCTTTAGCACGTCCGGTGACTCCGGTGAGATTCCTCAGCACTTGGTCACTGATTTCGTGGATATACTGGACGA
TGTTCGAAGGCACCTACGGAGAAAGCCCAGGCAAACGGGTTTTCGGACTCAAGGTCGTCAACGAAGAAGGAGAGGCCGTG
AGTCTTCCGGAGGCGGCCATTCGAAACGTTTCGAAGGCCCTACCCGTAGTGTGCTACGTGGACGGTGCGTTGATCCTGCT
GACCGAATCGCGACAACGGGCGTTCGACCTCCTGGCGGGGACGTTCGTCGTCACTTCAGGATGA

Upstream 100 bases:

>100_bases
CGATGTCGATCCCTACTACGATCACGTCCGAAACCACCCGGCCGGAGGCCTCTTAGGTTTATCAGACCGTAGAGCTCAGT
AACTTGCGGGGGCCGTTCAG

Downstream 100 bases:

>100_bases
GTTGCCTGGCGACGGAGTTCGCCATGTGATCGCCGCAGAGCTCTCGAACTACCTCTAAGCAGGCGTCGATTGCGAACGCT
GGGCCCCTACTAGTCACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV
SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG

Sequences:

>Translated_127_residues
MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV
SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG
>Mature_127_residues
MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV
SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13816; Mature: 13816

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ESPGKRVFGLKVVNEEGEAVSLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAG
CCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHHHHH
TFVVTSG
EEEEECC
>Mature Secondary Structure
MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ESPGKRVFGLKVVNEEGEAVSLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAG
CCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHHHHH
TFVVTSG
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA