| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093846
Identifier: 20093846
GI number: 20093846
Start: 388923
End: 389306
Strand: Direct
Name: 20093846
Synonym: MK0408
Alternate gene names: NA
Gene position: 388923-389306 (Clockwise)
Preceding gene: 20093844
Following gene: 20093848
Centisome position: 22.95
GC content: 56.77
Gene sequence:
>384_bases GTGAATCCGGCACCTTCCGAGCTGCGGTTCGGCGCCTACGCTATTGACTGCGTGATCACGGCCGTGATGTCATTGTTAAT ATGTCTGGCTTTAGCACGTCCGGTGACTCCGGTGAGATTCCTCAGCACTTGGTCACTGATTTCGTGGATATACTGGACGA TGTTCGAAGGCACCTACGGAGAAAGCCCAGGCAAACGGGTTTTCGGACTCAAGGTCGTCAACGAAGAAGGAGAGGCCGTG AGTCTTCCGGAGGCGGCCATTCGAAACGTTTCGAAGGCCCTACCCGTAGTGTGCTACGTGGACGGTGCGTTGATCCTGCT GACCGAATCGCGACAACGGGCGTTCGACCTCCTGGCGGGGACGTTCGTCGTCACTTCAGGATGA
Upstream 100 bases:
>100_bases CGATGTCGATCCCTACTACGATCACGTCCGAAACCACCCGGCCGGAGGCCTCTTAGGTTTATCAGACCGTAGAGCTCAGT AACTTGCGGGGGCCGTTCAG
Downstream 100 bases:
>100_bases GTTGCCTGGCGACGGAGTTCGCCATGTGATCGCCGCAGAGCTCTCGAACTACCTCTAAGCAGGCGTCGATTGCGAACGCT GGGCCCCTACTAGTCACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG
Sequences:
>Translated_127_residues MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG >Mature_127_residues MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYGESPGKRVFGLKVVNEEGEAV SLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAGTFVVTSG
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13816; Mature: 13816
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC ESPGKRVFGLKVVNEEGEAVSLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAG CCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHHHHH TFVVTSG EEEEECC >Mature Secondary Structure MNPAPSELRFGAYAIDCVITAVMSLLICLALARPVTPVRFLSTWSLISWIYWTMFEGTYG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC ESPGKRVFGLKVVNEEGEAVSLPEAAIRNVSKALPVVCYVDGALILLTESRQRAFDLLAG CCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCEEEEECCEEEEEECCHHHHHHHHHH TFVVTSG EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA