Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20093848

Identifier: 20093848

GI number: 20093848

Start: 389846

End: 390271

Strand: Direct

Name: 20093848

Synonym: MK0410

Alternate gene names: NA

Gene position: 389846-390271 (Clockwise)

Preceding gene: 20093846

Following gene: 20093849

Centisome position: 23.0

GC content: 59.15

Gene sequence:

>426_bases
TTGCTCGTCGTCTCCCTGGGGTGTCCGAAGATCCCACCGAAGATCTCCTCCGCGATTTACGCGTGCTACCGGTATGACGA
TAGAGCGTTAGTACTCAGCACCGAGGCGGGATGTAAGCTCCTCGAGTACGCCGACCCTGAGAAGGAGTACGTGGATGAAA
CTCGAACGTACGAGAAATACCTAGAGGACCCGGATGCCGCCGGTATCCTGCTCGCGTTCGTGACGAACGATACGGAATTA
CAGATAGCGGTCACCCTGAAGGAGGTATCGGAACCCGACGACGCGAGGGCGGTATGTACCGAGGAGTTCGAGGATCGGCT
CGAGGACTGCGGGTTCCTTACCGCACCGGTAACTGGTCGGCGGTGGAAGCACGACCCGAAGAGATGGGTTAAGGCGGTCG
AGGACGTGCTGGGGGCGAGTCGATGA

Upstream 100 bases:

>100_bases
CCAATCGAGCCCGCCGCGTGAGAGTACACTCACGACCGCGCCGAGCTCGAGCTCCTCAAACCCGTCGTCCACCAGCACCG
CGATCAAGGGGGAACCTCCC

Downstream 100 bases:

>100_bases
CGTTCTGCCTCGAGGAGCGGGAGTACGAGATACTAATGGCGAGAAGGCCGTTCGACGACTGTGCGAGATACATCGAATCG
AAGTTTGGAAACATCGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL
QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR

Sequences:

>Translated_141_residues
MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL
QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR
>Mature_141_residues
MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKYLEDPDAAGILLAFVTNDTEL
QIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGRRWKHDPKRWVKAVEDVLGASR

Specific function: Unknown

COG id: COG4081

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15879; Mature: 15879

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKY
CEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHH
LEDPDAAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGR
HCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCC
RWKHDPKRWVKAVEDVLGASR
CCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLVVSLGCPKIPPKISSAIYACYRYDDRALVLSTEAGCKLLEYADPEKEYVDETRTYEKY
CEEEECCCCCCCHHHHHHHHHHEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHH
LEDPDAAGILLAFVTNDTELQIAVTLKEVSEPDDARAVCTEEFEDRLEDCGFLTAPVTGR
HCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCC
RWKHDPKRWVKAVEDVLGASR
CCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA