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The map label for this gene is 20093836

Identifier: 20093836

GI number: 20093836

Start: 379633

End: 379872

Strand: Reverse

Name: 20093836

Synonym: MK0398

Alternate gene names: NA

Gene position: 379872-379633 (Counterclockwise)

Preceding gene: 20093837

Following gene: 20093835

Centisome position: 22.41

GC content: 60.42

Gene sequence:

>240_bases
GTGACGGTAGGACGCAGGTTGGACGCGTTCCTTAGGGACGTCGGTCTCGCCGAAAGCCGGCGTGAGGCCAAACGGCTGGT
GGAGTCGGGACGTGTGCGTGTGAACGGTAAGCTCGTCAGGAAGCCTTGGTGGCTGGTGTCCCCTGGAGACGAAATCGAAG
TTGACGGTGTTACCGTGCGGGTGGAAGACAATGGCGGCGAAAGGCGAGTTAGTCGGATCGAAGGTGCTCGTTCGGAATGA

Upstream 100 bases:

>100_bases
AGGACGTCGAGAAGGTGATCGACTGGCTGGCACCCGAGACGATCGACGGGAAGCCGATTTACGAGGTGAAGAAGCCGAGG
TTACGGGAGGAAGAGCTCGA

Downstream 100 bases:

>100_bases
CCGAGATGCGAACAGACTGTACTCCTCCATGTACGGGAAACCGTCACGTCGCGGTCTGCAATTGTGGCCTGAAGAAGCGC
TATTCTTATGTGAGATCGGT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MTVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVRVEDNGGERRVSRIEGARSE

Sequences:

>Translated_79_residues
MTVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVRVEDNGGERRVSRIEGARSE
>Mature_78_residues
TVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVRVEDNGGERRVSRIEGARSE

Specific function: Unknown

COG id: COG0522

COG function: function code J; Ribosomal protein S4 and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8930; Mature: 8799

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVR
CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCEEECCCEEEECCCCCEEECCEEEE
VEDNGGERRVSRIEGARSE
EECCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
TVGRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVR
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCEEECCCEEEECCCCCEEECCEEEE
VEDNGGERRVSRIEGARSE
EECCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA