| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093790
Identifier: 20093790
GI number: 20093790
Start: 341898
End: 342389
Strand: Direct
Name: 20093790
Synonym: MK0352
Alternate gene names: NA
Gene position: 341898-342389 (Clockwise)
Preceding gene: 20093788
Following gene: 20093792
Centisome position: 20.17
GC content: 57.32
Gene sequence:
>492_bases TTGGCCGAGACCATCGTGCGGAAGTTCGACCCGAACAAGTGGGTGTTAGTGCCCACCAGACACGCCTTAGAACGGCTCAG GAAGAGGGAACTGTCGCCGTCAGCCGACGTCCCCGAAGCCGTCCACGCACTCAGGAGGTTAGCCTCGACCACTAAGGTAC TGATAAAAAACGATGTATGGGTAGCGGTGGGGACCGAAAGGACACTAGTACTTTCCGAAATGAGAACTATGTCGCTAGAG AAGTACCAGGACGAGCTGAAGCGTCATCTGAGCAGATTACACCCCACCTACACCGTATACGTGATCACGGCGGAAGGATG TCGCCCGACCTCGGCAGGCCAGCTGGATGTCGACGATCTGGCGACCGAGTTCGAGTACGCCCGATTCTCGGGAGAAGCGC GTACGTTGGTGCTCGCCCGAGAGGGCGAGAAGGCGTTAGCAGTCGTTACGGTGCGTCCACCGCGAAAGAAGGAGAGAAAG CTCATCGAATGA
Upstream 100 bases:
>100_bases CCTCTCGTACATGGTCACCCAACCTTTCTCCGAACACTTACGACGGACCTCCTCTGGACTTAGCGACACCAACGTGATCA CCCACCGAGGGGATCGTGAG
Downstream 100 bases:
>100_bases CCCGCTCGAGCAGCTCGGCCACGAGCTTACCTTCTCGCTCGTCCCGGGCGGTGGTCACCACGAAAATCTCCTGGGTAGCC GCCCCTTCGGAGAGGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLE KYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERK LIE
Sequences:
>Translated_163_residues MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLE KYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERK LIE >Mature_162_residues AETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLEK YQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKL IE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18636; Mature: 18505
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVW CCCCHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCEE VAVGTERTLVLSEMRTMSLEKYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH ATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKLIE HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCC >Mature Secondary Structure AETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVW CCCHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCEE VAVGTERTLVLSEMRTMSLEKYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH ATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKLIE HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA