| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093788
Identifier: 20093788
GI number: 20093788
Start: 340738
End: 340962
Strand: Direct
Name: 20093788
Synonym: MK0350
Alternate gene names: NA
Gene position: 340738-340962 (Clockwise)
Preceding gene: 20093784
Following gene: 20093790
Centisome position: 20.1
GC content: 58.22
Gene sequence:
>225_bases ATGTTGCATGATCCGAACGACGACCCCTCGGAGTACGTGATCTACGTCATCGATCGTGGATCCTCGAGTGGGCTCCGTCG GATCTGGGGGGACGAGATCCAGGACGTTAAAAGGGGTTTCTTAGTACTGTGGAACGCGGAGATTCCAGTACATCGGGTAA TCCGGGTAGAGCGCGGTGGTAGGGTCATCTGGGAACGCGGGCGGCGAGCCCGTGGTCGTCGATAA
Upstream 100 bases:
>100_bases GTGGAAAGTACGAGCAACGTTAACGTCCGATACATGATGGCTCCCCCGGGGAGTGGGTAACGTGTCGCGCAAAACGGAAC TTGAAGAAATTTTTAGCCGC
Downstream 100 bases:
>100_bases AGGGCAGAGCCGCCACGGCCCCTATCCGCCCGCGCTCTCCGTCCCCGATCGAGACGACCTCGATCTCGCATATCTCCACC ACTTCATCGACCTCCTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR
Sequences:
>Translated_74_residues MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR >Mature_74_residues MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR
Specific function: Unknown
COG id: COG1531
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0248 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y350_METKA (Q8TYF0)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613635.1 - GeneID: 1477653 - GenomeReviews: AE009439_GR - KEGG: mka:MK0350 - NMPDR: fig|190192.1.peg.348 - BioCyc: MKAN190192:MK0350-MONOMER - HAMAP: MF_01245 - InterPro: IPR007547
Pfam domain/function: PF04457 DUF504
EC number: NA
Molecular weight: Translated: 8739; Mature: 8739
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGG CCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCEEEEECCCCCEEEEEEECCCC RVIWERGRRARGRR EEEECCCCCCCCCC >Mature Secondary Structure MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGG CCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCEEEEECCCCCEEEEEEECCCC RVIWERGRRARGRR EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014