Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093788

Identifier: 20093788

GI number: 20093788

Start: 340738

End: 340962

Strand: Direct

Name: 20093788

Synonym: MK0350

Alternate gene names: NA

Gene position: 340738-340962 (Clockwise)

Preceding gene: 20093784

Following gene: 20093790

Centisome position: 20.1

GC content: 58.22

Gene sequence:

>225_bases
ATGTTGCATGATCCGAACGACGACCCCTCGGAGTACGTGATCTACGTCATCGATCGTGGATCCTCGAGTGGGCTCCGTCG
GATCTGGGGGGACGAGATCCAGGACGTTAAAAGGGGTTTCTTAGTACTGTGGAACGCGGAGATTCCAGTACATCGGGTAA
TCCGGGTAGAGCGCGGTGGTAGGGTCATCTGGGAACGCGGGCGGCGAGCCCGTGGTCGTCGATAA

Upstream 100 bases:

>100_bases
GTGGAAAGTACGAGCAACGTTAACGTCCGATACATGATGGCTCCCCCGGGGAGTGGGTAACGTGTCGCGCAAAACGGAAC
TTGAAGAAATTTTTAGCCGC

Downstream 100 bases:

>100_bases
AGGGCAGAGCCGCCACGGCCCCTATCCGCCCGCGCTCTCCGTCCCCGATCGAGACGACCTCGATCTCGCATATCTCCACC
ACTTCATCGACCTCCTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR

Sequences:

>Translated_74_residues
MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR
>Mature_74_residues
MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGGRVIWERGRRARGRR

Specific function: Unknown

COG id: COG1531

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0248 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y350_METKA (Q8TYF0)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613635.1
- GeneID:   1477653
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0350
- NMPDR:   fig|190192.1.peg.348
- BioCyc:   MKAN190192:MK0350-MONOMER
- HAMAP:   MF_01245
- InterPro:   IPR007547

Pfam domain/function: PF04457 DUF504

EC number: NA

Molecular weight: Translated: 8739; Mature: 8739

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGG
CCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCEEEEECCCCCEEEEEEECCCC
RVIWERGRRARGRR
EEEECCCCCCCCCC
>Mature Secondary Structure
MLHDPNDDPSEYVIYVIDRGSSSGLRRIWGDEIQDVKRGFLVLWNAEIPVHRVIRVERGG
CCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHCCCEEEEECCCCCEEEEEEECCCC
RVIWERGRRARGRR
EEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014