Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093790

Identifier: 20093790

GI number: 20093790

Start: 341898

End: 342389

Strand: Direct

Name: 20093790

Synonym: MK0352

Alternate gene names: NA

Gene position: 341898-342389 (Clockwise)

Preceding gene: 20093788

Following gene: 20093792

Centisome position: 20.17

GC content: 57.32

Gene sequence:

>492_bases
TTGGCCGAGACCATCGTGCGGAAGTTCGACCCGAACAAGTGGGTGTTAGTGCCCACCAGACACGCCTTAGAACGGCTCAG
GAAGAGGGAACTGTCGCCGTCAGCCGACGTCCCCGAAGCCGTCCACGCACTCAGGAGGTTAGCCTCGACCACTAAGGTAC
TGATAAAAAACGATGTATGGGTAGCGGTGGGGACCGAAAGGACACTAGTACTTTCCGAAATGAGAACTATGTCGCTAGAG
AAGTACCAGGACGAGCTGAAGCGTCATCTGAGCAGATTACACCCCACCTACACCGTATACGTGATCACGGCGGAAGGATG
TCGCCCGACCTCGGCAGGCCAGCTGGATGTCGACGATCTGGCGACCGAGTTCGAGTACGCCCGATTCTCGGGAGAAGCGC
GTACGTTGGTGCTCGCCCGAGAGGGCGAGAAGGCGTTAGCAGTCGTTACGGTGCGTCCACCGCGAAAGAAGGAGAGAAAG
CTCATCGAATGA

Upstream 100 bases:

>100_bases
CCTCTCGTACATGGTCACCCAACCTTTCTCCGAACACTTACGACGGACCTCCTCTGGACTTAGCGACACCAACGTGATCA
CCCACCGAGGGGATCGTGAG

Downstream 100 bases:

>100_bases
CCCGCTCGAGCAGCTCGGCCACGAGCTTACCTTCTCGCTCGTCCCGGGCGGTGGTCACCACGAAAATCTCCTGGGTAGCC
GCCCCTTCGGAGAGGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLE
KYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERK
LIE

Sequences:

>Translated_163_residues
MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLE
KYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERK
LIE
>Mature_162_residues
AETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVWVAVGTERTLVLSEMRTMSLEK
YQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDLATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKL
IE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18636; Mature: 18505

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVW
CCCCHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCEE
VAVGTERTLVLSEMRTMSLEKYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH
ATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKLIE
HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCC
>Mature Secondary Structure 
AETIVRKFDPNKWVLVPTRHALERLRKRELSPSADVPEAVHALRRLASTTKVLIKNDVW
CCCHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCEE
VAVGTERTLVLSEMRTMSLEKYQDELKRHLSRLHPTYTVYVITAEGCRPTSAGQLDVDDL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHH
ATEFEYARFSGEARTLVLAREGEKALAVVTVRPPRKKERKLIE
HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA