| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093748
Identifier: 20093748
GI number: 20093748
Start: 297654
End: 298370
Strand: Reverse
Name: 20093748
Synonym: MK0308
Alternate gene names: NA
Gene position: 298370-297654 (Counterclockwise)
Preceding gene: 20093749
Following gene: 20093740
Centisome position: 17.6
GC content: 66.39
Gene sequence:
>717_bases TTGACCGAGGCGTCGTTCGATGGTAAGTACGTCAAACGCGTCTTCGGCGTCCCCGACGAGGTCGTGGACGGCGCGGTAGT CCGTGCCTGGGACATAATCAGGGAGCGTCGCTCCAAGGGACGGGTCAGGATCAGGAGGCCCGACGAGGTGTGGCCGATCG GTCGAGCCGTGGCGCGTTTGGCGTCAGTAGCCCGGGTGTCCGTGAGAAGGGTCAAGGGTGTGGAATGTCCGGAGGACGCG CTGGATCAAGTGCTCGGGGACGCGGAACCGTCGTCGCCCGCTCTCAGGACGCTACGGAGTCTGACGAGGGGTCGGTGCAC GATCGGCTTCCCGGTCCTGACGCCCGAGCTGACGCTGGTGGTGTGGGGTGCGAACACCGAGGAGCTGTCGTCGTCCGTCC TCGATCTGACCCACCATCCCGCCGTCCGGACGCTGGTCTCCCTGGCCGTACTGGACGACGTAGGTGAGTACCTGGTCGAC CGTTACGACGATCGCGCGGAACAGTTGTCCGAGGCGCTTCAGCGGGCGTACGACGGACGTGGAGCCCGGCTGCTCGGACT CTGTCTCTGCGCGTGGCTGTCGGAGAAGCTCGGGGGCGAGTTCGAGACGTGGTGGAACGAGGGCGGTGGATGGCGGGCCC TCTACAGTGTCGTGCGTGAAAGCGAGCTGGTGGAGTCGACCGTGAGGGAACGCGTCGGGGTCGAGCCCGGGAAGTAG
Upstream 100 bases:
>100_bases GGGCGCGTCCCGACAAGAGGCACTCGGGGTACTTCCGCGAGGTGGCCCGGCACATCCGGGCGGATTGGAACAGACGGAGG TACGGATCGGGGGTCCGGAT
Downstream 100 bases:
>100_bases GCCCGCGGTTCGGCCCGTACCGTTTCCGTTTCACGGTAAGCCGTTCTCGAGTTCTTCGACTCCGTTTCTATCCCTACTCA CCGCGGAAGGAATCAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTEASFDGKYVKRVFGVPDEVVDGAVVRAWDIIRERRSKGRVRIRRPDEVWPIGRAVARLASVARVSVRRVKGVECPEDA LDQVLGDAEPSSPALRTLRSLTRGRCTIGFPVLTPELTLVVWGANTEELSSSVLDLTHHPAVRTLVSLAVLDDVGEYLVD RYDDRAEQLSEALQRAYDGRGARLLGLCLCAWLSEKLGGEFETWWNEGGGWRALYSVVRESELVESTVRERVGVEPGK
Sequences:
>Translated_238_residues MTEASFDGKYVKRVFGVPDEVVDGAVVRAWDIIRERRSKGRVRIRRPDEVWPIGRAVARLASVARVSVRRVKGVECPEDA LDQVLGDAEPSSPALRTLRSLTRGRCTIGFPVLTPELTLVVWGANTEELSSSVLDLTHHPAVRTLVSLAVLDDVGEYLVD RYDDRAEQLSEALQRAYDGRGARLLGLCLCAWLSEKLGGEFETWWNEGGGWRALYSVVRESELVESTVRERVGVEPGK >Mature_237_residues TEASFDGKYVKRVFGVPDEVVDGAVVRAWDIIRERRSKGRVRIRRPDEVWPIGRAVARLASVARVSVRRVKGVECPEDAL DQVLGDAEPSSPALRTLRSLTRGRCTIGFPVLTPELTLVVWGANTEELSSSVLDLTHHPAVRTLVSLAVLDDVGEYLVDR YDDRAEQLSEALQRAYDGRGARLLGLCLCAWLSEKLGGEFETWWNEGGGWRALYSVVRESELVESTVRERVGVEPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26472; Mature: 26341
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEASFDGKYVKRVFGVPDEVVDGAVVRAWDIIRERRSKGRVRIRRPDEVWPIGRAVARL CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH ASVARVSVRRVKGVECPEDALDQVLGDAEPSSPALRTLRSLTRGRCTIGFPVLTPELTLV HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEECCCEECCCEEEE VWGANTEELSSSVLDLTHHPAVRTLVSLAVLDDVGEYLVDRYDDRAEQLSEALQRAYDGR EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GARLLGLCLCAWLSEKLGGEFETWWNEGGGWRALYSVVRESELVESTVRERVGVEPGK CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEASFDGKYVKRVFGVPDEVVDGAVVRAWDIIRERRSKGRVRIRRPDEVWPIGRAVARL CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH ASVARVSVRRVKGVECPEDALDQVLGDAEPSSPALRTLRSLTRGRCTIGFPVLTPELTLV HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEECCCEECCCEEEE VWGANTEELSSSVLDLTHHPAVRTLVSLAVLDDVGEYLVDRYDDRAEQLSEALQRAYDGR EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GARLLGLCLCAWLSEKLGGEFETWWNEGGGWRALYSVVRESELVESTVRERVGVEPGK CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA