| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093740
Identifier: 20093740
GI number: 20093740
Start: 289372
End: 290193
Strand: Reverse
Name: 20093740
Synonym: MK0300
Alternate gene names: NA
Gene position: 290193-289372 (Counterclockwise)
Preceding gene: 20093748
Following gene: 20093739
Centisome position: 17.12
GC content: 57.66
Gene sequence:
>822_bases GTGCTGGGCCCGTTGATCGCGCTGGTGAGTGTGGTCCCGACGGGAGCGGCCGCGGACCACGTGACCGACGTGACGTCTAA AGTGAACGTCGACGGCGATTACGAGGCGTGCAAGGACCTGCTCGTAGGCGTCGAGGTGTACGACGATCAGGGGTACGTGA TCGCGAGTTGTTGTTGGGACGGTAGGTGTGATGCCCTCGGAGAGACGAAGGTCAGTGAGAACCACCTCAGCCGTACCGTG GACAGGTTCATCGTGAAGATGACCGTACGCTACAAGAACCAGCTGTTGTTGGACGAGAGGGTCTTCATACGCGTAATCCC CGGGCAGGGTGTCATCATCGAGTTCAACGGCCGAACTATCGAGCTGAGGAGCGCCAACGGCACGTGGGGGCCGGAGGAAC CGCTCAGGGTCGTGCGGACGATCGACGGGAAAACCGTGGGGATAACCTTCCGGCCCAGTGCTAAGGTGGAGCACGCGGAA CAACTATCGAACCAGTGGGTAGTCGATTTCCTCTACTCGATAGACGGTGATGTAATCGTTCACGATAAGAAGGGCGATTA CCACATCACCTTCCAGGCGCACGTGAAACACACGCCCCTGAAAAATGCTGAACATGATTATATGCAAACTTGCCCGTACG GGAAGAAGAAAACCGTAGATGAAGAGCTTACCCATGGGACGTTCGGTCACCTCGTGGACGATCACGCGACGAAGATCGAA GATTTGACGCGAGCGTGGGCGAACGAGAAGATGCCCGTGAACCCGCTGTTACCGGCGCTCGCGGCGGTACTGTCACTCCT AGGGATCAGGAGGGAGTATTAG
Upstream 100 bases:
>100_bases ACCCATGATGTCTTATCGAAAAGACCGGTACGACAGCCCGCGCGTGCGGCCGATGGGCCCGCTTGACGGGGGAGGGAAGA TGAGGTGCGGGTTTCCCCTT
Downstream 100 bases:
>100_bases AATCGTGAACACTCGTCTCCCTCCAATATCATTGTCCTCCCCAGGTACAATCTCGGTCCAAGGAGACCAATCGTATGCGT ATCCTCGGGGCGGTCGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLGPLIALVSVVPTGAAADHVTDVTSKVNVDGDYEACKDLLVGVEVYDDQGYVIASCCWDGRCDALGETKVSENHLSRTV DRFIVKMTVRYKNQLLLDERVFIRVIPGQGVIIEFNGRTIELRSANGTWGPEEPLRVVRTIDGKTVGITFRPSAKVEHAE QLSNQWVVDFLYSIDGDVIVHDKKGDYHITFQAHVKHTPLKNAEHDYMQTCPYGKKKTVDEELTHGTFGHLVDDHATKIE DLTRAWANEKMPVNPLLPALAAVLSLLGIRREY
Sequences:
>Translated_273_residues MLGPLIALVSVVPTGAAADHVTDVTSKVNVDGDYEACKDLLVGVEVYDDQGYVIASCCWDGRCDALGETKVSENHLSRTV DRFIVKMTVRYKNQLLLDERVFIRVIPGQGVIIEFNGRTIELRSANGTWGPEEPLRVVRTIDGKTVGITFRPSAKVEHAE QLSNQWVVDFLYSIDGDVIVHDKKGDYHITFQAHVKHTPLKNAEHDYMQTCPYGKKKTVDEELTHGTFGHLVDDHATKIE DLTRAWANEKMPVNPLLPALAAVLSLLGIRREY >Mature_273_residues MLGPLIALVSVVPTGAAADHVTDVTSKVNVDGDYEACKDLLVGVEVYDDQGYVIASCCWDGRCDALGETKVSENHLSRTV DRFIVKMTVRYKNQLLLDERVFIRVIPGQGVIIEFNGRTIELRSANGTWGPEEPLRVVRTIDGKTVGITFRPSAKVEHAE QLSNQWVVDFLYSIDGDVIVHDKKGDYHITFQAHVKHTPLKNAEHDYMQTCPYGKKKTVDEELTHGTFGHLVDDHATKIE DLTRAWANEKMPVNPLLPALAAVLSLLGIRREY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30466; Mature: 30466
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGPLIALVSVVPTGAAADHVTDVTSKVNVDGDYEACKDLLVGVEVYDDQGYVIASCCWD CCHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHHHEEEEEECCCCCEEEEEECC GRCDALGETKVSENHLSRTVDRFIVKMTVRYKNQLLLDERVFIRVIPGQGVIIEFNGRTI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEEECCCEE ELRSANGTWGPEEPLRVVRTIDGKTVGITFRPSAKVEHAEQLSNQWVVDFLYSIDGDVIV EEECCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCEEE HDKKGDYHITFQAHVKHTPLKNAEHDYMQTCPYGKKKTVDEELTHGTFGHLVDDHATKIE ECCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH DLTRAWANEKMPVNPLLPALAAVLSLLGIRREY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLGPLIALVSVVPTGAAADHVTDVTSKVNVDGDYEACKDLLVGVEVYDDQGYVIASCCWD CCHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHHHEEEEEECCCCCEEEEEECC GRCDALGETKVSENHLSRTVDRFIVKMTVRYKNQLLLDERVFIRVIPGQGVIIEFNGRTI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEEECCCEE ELRSANGTWGPEEPLRVVRTIDGKTVGITFRPSAKVEHAEQLSNQWVVDFLYSIDGDVIV EEECCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCEEE HDKKGDYHITFQAHVKHTPLKNAEHDYMQTCPYGKKKTVDEELTHGTFGHLVDDHATKIE ECCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH DLTRAWANEKMPVNPLLPALAAVLSLLGIRREY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA