| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is PpsA [H]
Identifier: 20093692
GI number: 20093692
Start: 242469
End: 244781
Strand: Direct
Name: PpsA [H]
Synonym: MK0252
Alternate gene names: 20093692
Gene position: 242469-244781 (Clockwise)
Preceding gene: 20093691
Following gene: 20093693
Centisome position: 14.31
GC content: 60.61
Gene sequence:
>2313_bases GTGAAGTACGTCCGGTGGTTCGAGGAGATATCGAAGGATGACGTCGACGTCGCCGGAGGCAAGGGCGCGAACCTGGGCGA GATGACGCAGGCGGGACTACCAGTCCCGCCCGGCTTCGTGGTCCTGTCCACAGCCTACGATGAGTTCCTCGAGCGCACTG GCCTGAAGGAGAAGATAAAGGAAATACTTTCCTCCCACGACCTGTCCGACAACGACGAGCTTCAGGAGGCCGCGGAGGAG ATTCAGCGGCTGATCGTTGAGGTCGAAATGCCGGAGGAGATCCGTGAGGAGATCGTGAAAGCCTACCGGGAGCTCTGCGA GAAGGTCGGTAAGGAAGAGGAGTTCGTAGCTGTCCGCTCGTCGGCGACCGCCGAAGACTTACCGGAAGCTTCCTTCGCGG GCCAGCAGGAGACGTTCCTGAACGTCCAAGGTGAGGAGGACGTCGTGAAGTACGTGCAGAAGTGTTGGGCGTCCCTATTC ACCCCTCGGGCCGTGGCTTACCGGGAGGAGCAAGGGTTCGAGCATCTGGACGTTTCGATCGCCGTCGTCGTCCAGAAGAT GGTAGATTCGGAGAAGTCAGGAGTAATGTTCACGGTCCACCCCTACACCGGCGAGCGGGACAAGATGGTGATCGAAGCCG TGTGGGGTCTCGGCGAGGCCGTAGTCAGTGGGGAAGTCACTCCCGACACCTACATCGTCGACAAGAACACGTTCGAGGTC ATCGAGGAGCAGATATCCGAGCAGGAGTGGATGTACACGAAGGACCCGGAAACAGGGGAGACGGTCAAGGCCGAGGTGCC TGAGGATAAACGCGACGCTAGGAAGCTGACGGACGAAGAGATCAAGGAACTGGCGGAGATCGGAGTAGCCGTGGAGGAGC ACTACGGGTTCCCGCAGGATATCGAGTGGGCCATCGAGGACGACGAAGTATACGTGCTGCAGTCGCGTCCGGTCACCACA ATACCAGAGGAGAAGGGCGGAGAGGAAGAGATAGAGGCGGAAGAGTTGGAGGGCAAGATCCTCGTCCGCGGCCTAGGGGC CAGCCCGGGGATCGGTACGGGCGAAGTCAAGATCGTGATGGACGTGGACGAGATCGACAAGGTGGAGGAAGGGGACGTCC TGGTCACCAAGATGACCACACCGGACATGGTCCCGGCGATGCGGAAGGCGTCGGCCATAGTCACCGACGAAGGCGGAATC ACATGCCACGCCGCGATCGTGTCGCGAGAGCTGGGAATCCCGTGTGTGGTCGGTACGGGCAACGCCACGGAGGTCCTCGA GGAGGGGCAGGTGGTAACGGTCGACGGAGAGCGTGGAGTCGTGTACGAGGGTGACGTGCGCAAGGCCCTCCGTGCCGAGG AGGAAGAGGAGGAGCGGGAAGAGAAGGAGATCGTGGTGGAGCGCCCGGCCGCTGAGCCAGTGACCGCTACGGAGATCAAG GTTAACGTCAGCATGCCCGAAGCCGCGGAGCGTGCCGCTAAGACGGGAGCCGACGGTGTCGGATTGCTCCGTATCGAACA CATGATCCTGGGCGTGGGAGTACATCCCCGCAAGCTCATCGAGGAGGGTGAGCGCGAGAAACTCGTGCAAGTGTTGATGG ACGGGATCCGCAAGGTCGCGGACGCCTTCTACCCGAAGCCCGTATGGGTCAGAACCCTGGACGCTCCGACCGACGAGTTC CGCGAGCTCGAAGGTGGTGAGCGGGAGCCCGAAGAAACCAACCCGATGCTCGGTTGGAGAGGTATTCGTCGCGATCTCGA GGAGCGGGAGACTCTCGAGTGTCAGTTCGAGGCTATCCGCCGCCTCCACCAGGAGGGTTACGATAACATCGGCGTGATGA TTCCGTTGGTACAGCACCCCGAAGAACTGCGCCGCGCTAAGCGGATCGCCAAGGAAGTAGGGCTCAAACCGCATCGTCAG GTCGAGTTCGGAATGATGGTGGAAACACCTGCCGCCGCGGTACTAATCGACGAATTCATCGAAGTAGGCCTCGACTTCGT GAGCCTCGGTACCAACGACCTCACCCAGTACACGTTGGCGGTCGACAGGAACAACGACAAGGTGGCATACCTCTACGACG AGAAGCACCCGGCAGTACTCCGGCTGATCAAACACGTCATCAACGAGTGCAAGGAGGCTGGAGTGAAGACGAGCATCTGC GGTCAGGCGGGTAGCGACCCGAAGATGGCCGAGATACTAGTGAAAGCGGGCATCGACAGCATCTCGGCGAACATCGACGC GGTGCCCCAGATCCGGCGGATCGTAGCCCGGGTAGAGCGGAAGATACTGCTGGATAAGATGAGGGAGTTCTAA
Upstream 100 bases:
>100_bases GGGCATGAAGTTCCCGTTCCCGTTCACCATAGTGGTCGACAAGGGTGAAGAACTGGTTCAGGACTGATGCGATACCGATC CGTGCTGAGGGGGGCCCACC
Downstream 100 bases:
>100_bases CGCCCGTGTCCCTCCTGAAACATCTTTCCGAGCTGGGATTGTCCGAACGAGAGGCGCGGGTGTACCTGTACCTGGTCCGC GCCGGTGAGGCCAACGCACG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MKYVRWFEEISKDDVDVAGGKGANLGEMTQAGLPVPPGFVVLSTAYDEFLERTGLKEKIKEILSSHDLSDNDELQEAAEE IQRLIVEVEMPEEIREEIVKAYRELCEKVGKEEEFVAVRSSATAEDLPEASFAGQQETFLNVQGEEDVVKYVQKCWASLF TPRAVAYREEQGFEHLDVSIAVVVQKMVDSEKSGVMFTVHPYTGERDKMVIEAVWGLGEAVVSGEVTPDTYIVDKNTFEV IEEQISEQEWMYTKDPETGETVKAEVPEDKRDARKLTDEEIKELAEIGVAVEEHYGFPQDIEWAIEDDEVYVLQSRPVTT IPEEKGGEEEIEAEELEGKILVRGLGASPGIGTGEVKIVMDVDEIDKVEEGDVLVTKMTTPDMVPAMRKASAIVTDEGGI TCHAAIVSRELGIPCVVGTGNATEVLEEGQVVTVDGERGVVYEGDVRKALRAEEEEEEREEKEIVVERPAAEPVTATEIK VNVSMPEAAERAAKTGADGVGLLRIEHMILGVGVHPRKLIEEGEREKLVQVLMDGIRKVADAFYPKPVWVRTLDAPTDEF RELEGGEREPEETNPMLGWRGIRRDLEERETLECQFEAIRRLHQEGYDNIGVMIPLVQHPEELRRAKRIAKEVGLKPHRQ VEFGMMVETPAAAVLIDEFIEVGLDFVSLGTNDLTQYTLAVDRNNDKVAYLYDEKHPAVLRLIKHVINECKEAGVKTSIC GQAGSDPKMAEILVKAGIDSISANIDAVPQIRRIVARVERKILLDKMREF
Sequences:
>Translated_770_residues MKYVRWFEEISKDDVDVAGGKGANLGEMTQAGLPVPPGFVVLSTAYDEFLERTGLKEKIKEILSSHDLSDNDELQEAAEE IQRLIVEVEMPEEIREEIVKAYRELCEKVGKEEEFVAVRSSATAEDLPEASFAGQQETFLNVQGEEDVVKYVQKCWASLF TPRAVAYREEQGFEHLDVSIAVVVQKMVDSEKSGVMFTVHPYTGERDKMVIEAVWGLGEAVVSGEVTPDTYIVDKNTFEV IEEQISEQEWMYTKDPETGETVKAEVPEDKRDARKLTDEEIKELAEIGVAVEEHYGFPQDIEWAIEDDEVYVLQSRPVTT IPEEKGGEEEIEAEELEGKILVRGLGASPGIGTGEVKIVMDVDEIDKVEEGDVLVTKMTTPDMVPAMRKASAIVTDEGGI TCHAAIVSRELGIPCVVGTGNATEVLEEGQVVTVDGERGVVYEGDVRKALRAEEEEEEREEKEIVVERPAAEPVTATEIK VNVSMPEAAERAAKTGADGVGLLRIEHMILGVGVHPRKLIEEGEREKLVQVLMDGIRKVADAFYPKPVWVRTLDAPTDEF RELEGGEREPEETNPMLGWRGIRRDLEERETLECQFEAIRRLHQEGYDNIGVMIPLVQHPEELRRAKRIAKEVGLKPHRQ VEFGMMVETPAAAVLIDEFIEVGLDFVSLGTNDLTQYTLAVDRNNDKVAYLYDEKHPAVLRLIKHVINECKEAGVKTSIC GQAGSDPKMAEILVKAGIDSISANIDAVPQIRRIVARVERKILLDKMREF >Mature_770_residues MKYVRWFEEISKDDVDVAGGKGANLGEMTQAGLPVPPGFVVLSTAYDEFLERTGLKEKIKEILSSHDLSDNDELQEAAEE IQRLIVEVEMPEEIREEIVKAYRELCEKVGKEEEFVAVRSSATAEDLPEASFAGQQETFLNVQGEEDVVKYVQKCWASLF TPRAVAYREEQGFEHLDVSIAVVVQKMVDSEKSGVMFTVHPYTGERDKMVIEAVWGLGEAVVSGEVTPDTYIVDKNTFEV IEEQISEQEWMYTKDPETGETVKAEVPEDKRDARKLTDEEIKELAEIGVAVEEHYGFPQDIEWAIEDDEVYVLQSRPVTT IPEEKGGEEEIEAEELEGKILVRGLGASPGIGTGEVKIVMDVDEIDKVEEGDVLVTKMTTPDMVPAMRKASAIVTDEGGI TCHAAIVSRELGIPCVVGTGNATEVLEEGQVVTVDGERGVVYEGDVRKALRAEEEEEEREEKEIVVERPAAEPVTATEIK VNVSMPEAAERAAKTGADGVGLLRIEHMILGVGVHPRKLIEEGEREKLVQVLMDGIRKVADAFYPKPVWVRTLDAPTDEF RELEGGEREPEETNPMLGWRGIRRDLEERETLECQFEAIRRLHQEGYDNIGVMIPLVQHPEELRRAKRIAKEVGLKPHRQ VEFGMMVETPAAAVLIDEFIEVGLDFVSLGTNDLTQYTLAVDRNNDKVAYLYDEKHPAVLRLIKHVINECKEAGVKTSIC GQAGSDPKMAEILVKAGIDSISANIDAVPQIRRIVARVERKILLDKMREF
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=807, Percent_Identity=39.1573729863693, Blast_Score=503, Evalue=1e-143, Organism=Escherichia coli, GI1788756, Length=406, Percent_Identity=32.512315270936, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1789193, Length=400, Percent_Identity=31.5, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI48994992, Length=399, Percent_Identity=28.0701754385965, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1788726, Length=406, Percent_Identity=26.3546798029557, Blast_Score=130, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17564524, Length=330, Percent_Identity=32.1212121212121, Blast_Score=136, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 85981; Mature: 85981
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVRWFEEISKDDVDVAGGKGANLGEMTQAGLPVPPGFVVLSTAYDEFLERTGLKEKIK CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCHHHHHH EILSSHDLSDNDELQEAAEEIQRLIVEVEMPEEIREEIVKAYRELCEKVGKEEEFVAVRS HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC SATAEDLPEASFAGQQETFLNVQGEEDVVKYVQKCWASLFTPRAVAYREEQGFEHLDVSI CCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH AVVVQKMVDSEKSGVMFTVHPYTGERDKMVIEAVWGLGEAVVSGEVTPDTYIVDKNTFEV HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHH IEEQISEQEWMYTKDPETGETVKAEVPEDKRDARKLTDEEIKELAEIGVAVEEHYGFPQD HHHHHHHCCCEEECCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCC IEWAIEDDEVYVLQSRPVTTIPEEKGGEEEIEAEELEGKILVRGLGASPGIGTGEVKIVM CCEEEECCCEEEECCCCCCCCCCCCCCCHHCCHHHCCCEEEEEECCCCCCCCCCCEEEEE DVDEIDKVEEGDVLVTKMTTPDMVPAMRKASAIVTDEGGITCHAAIVSRELGIPCVVGTG EHHHHCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCCEEEHHHHHHCCCCEEEEECC NATEVLEEGQVVTVDGERGVVYEGDVRKALRAEEEEEEREEKEIVVERPAAEPVTATEIK CHHHHHHCCCEEEEECCCCEEEECHHHHHHHCCHHHHHHHHHHEEEECCCCCCCEEEEEE VNVSMPEAAERAAKTGADGVGLLRIEHMILGVGVHPRKLIEEGEREKLVQVLMDGIRKVA EEECCCHHHHHHHHCCCCCCHHHEEHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH DAFYPKPVWVRTLDAPTDEFRELEGGEREPEETNPMLGWRGIRRDLEERETLECQFEAIR HHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLHQEGYDNIGVMIPLVQHPEELRRAKRIAKEVGLKPHRQVEFGMMVETPAAAVLIDEFI HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEECEEECCCHHHHHHHHHH EVGLDFVSLGTNDLTQYTLAVDRNNDKVAYLYDEKHPAVLRLIKHVINECKEAGVKTSIC HHCCHHEECCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEC GQAGSDPKMAEILVKAGIDSISANIDAVPQIRRIVARVERKILLDKMREF CCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYVRWFEEISKDDVDVAGGKGANLGEMTQAGLPVPPGFVVLSTAYDEFLERTGLKEKIK CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCHHHHHH EILSSHDLSDNDELQEAAEEIQRLIVEVEMPEEIREEIVKAYRELCEKVGKEEEFVAVRS HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC SATAEDLPEASFAGQQETFLNVQGEEDVVKYVQKCWASLFTPRAVAYREEQGFEHLDVSI CCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH AVVVQKMVDSEKSGVMFTVHPYTGERDKMVIEAVWGLGEAVVSGEVTPDTYIVDKNTFEV HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEEECCCHHHH IEEQISEQEWMYTKDPETGETVKAEVPEDKRDARKLTDEEIKELAEIGVAVEEHYGFPQD HHHHHHHCCCEEECCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCC IEWAIEDDEVYVLQSRPVTTIPEEKGGEEEIEAEELEGKILVRGLGASPGIGTGEVKIVM CCEEEECCCEEEECCCCCCCCCCCCCCCHHCCHHHCCCEEEEEECCCCCCCCCCCEEEEE DVDEIDKVEEGDVLVTKMTTPDMVPAMRKASAIVTDEGGITCHAAIVSRELGIPCVVGTG EHHHHCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCCEEEHHHHHHCCCCEEEEECC NATEVLEEGQVVTVDGERGVVYEGDVRKALRAEEEEEEREEKEIVVERPAAEPVTATEIK CHHHHHHCCCEEEEECCCCEEEECHHHHHHHCCHHHHHHHHHHEEEECCCCCCCEEEEEE VNVSMPEAAERAAKTGADGVGLLRIEHMILGVGVHPRKLIEEGEREKLVQVLMDGIRKVA EEECCCHHHHHHHHCCCCCCHHHEEHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH DAFYPKPVWVRTLDAPTDEFRELEGGEREPEETNPMLGWRGIRRDLEERETLECQFEAIR HHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLHQEGYDNIGVMIPLVQHPEELRRAKRIAKEVGLKPHRQVEFGMMVETPAAAVLIDEFI HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEECEEECCCHHHHHHHHHH EVGLDFVSLGTNDLTQYTLAVDRNNDKVAYLYDEKHPAVLRLIKHVINECKEAGVKTSIC HHCCHHEECCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEC GQAGSDPKMAEILVKAGIDSISANIDAVPQIRRIVARVERKILLDKMREF CCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]