| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093682
Identifier: 20093682
GI number: 20093682
Start: 230076
End: 231260
Strand: Direct
Name: 20093682
Synonym: MK0242
Alternate gene names: NA
Gene position: 230076-231260 (Clockwise)
Preceding gene: 20093679
Following gene: 20093685
Centisome position: 13.57
GC content: 62.11
Gene sequence:
>1185_bases ATGGGAAGATTCGAGCGCAACTTGGCGGCGATGTTCACGGAATACGCCCTGATCAGCACGCTCCAGGCCCTCTTCTGGAT CGTGCTACCTAGGACCCTGGGCCCTCAGCAGTTCGGGAAGCTCGTGCTTCTGATCAACTTGGCGGGGTTCCTCTCCGACC CCATCCATCAGGCGGTGGCCTTCGCGTGTTCTCCCGAGCTGTTGGGTCTCGGGGATAGGGAGCGCGCCTCCCTGTGCGTT TCAGCTGTGATCGTCTCATTGATGCTCTCCTTCGCGGTCGCTTCGGCGATGCTGCTCGCCATCACCTTCCTACCTGTACC GGAGAAGCTCCGTATCGTGTCGGATCCGTGGGTTGCCTCCGGCTTGTTGGTCTTATGTATGTCACCGGTGACGAAGGTCG TGGAACCGTTCCTCCTCGCCGCCGGACGGAACGTGTTCGTGGTGGCCATAGCCCTGGGTCACGCCGCTAAGGTGGTGATT CCGCCGCTACTGAGGACTTCGTGGGTCGGAGCGGCGATATGTACCGGACTCTGCCCGTTATTGGCCGGCCTGGCGACCCT ACCGCTCGTCGGTAGGCCTCGGGGATGGAATTTCGCGATCGGGTACCTCACACGCGGTATGGTCATCGTCGTGGATCGTC TCGTCGAGTTGGGATCGTACGCGTACGCGGTCCTCCTAACGTACCTCCTGTACGGCTCGAAGACCTCGGCGTTCGTCGGT CTGGGGTTGGCGGCCTACAAGTTCGCGGCTCTGACGTTGGAGGCGTTCGTACCGCCGATAACGCTCGAAGTCGGGGCGGG CGAGGAGGAACAGGCGTTCAGGGGACTACGCCGGTACCTCGTCCCGGCGAGTATCGCTACGGCCGTTGCGATCGTCTCGT GCGCTGACCTCGCACCGGTGGTTCTCTCGACCGAGTACGGGCCGGCGGTGCCGATCGTCCGATGGTTCTCGCTCCCCACA CTCCTGCTCCCTTACCACATCGCACTACGGGCGTACCTCATCGGAAGCCGTAGATTGCGTCTGCTCCTCGTGTACCGTAC CCTTTACGCCTCCTCGTTCTTCGTCATCCTTCATACGCTGACCGGAGCGTTCGGGCCCGTGAGCGTGCCACTGGGGTTGT TAGCGGCTCTTTCGTCCGCACCTCCGATGGTAGCGATGATCCGACGTCATACGGTCACCGAATGA
Upstream 100 bases:
>100_bases ATCGCGCACGCCGCGAGGGTCGCAGGTGCGGACGCTACGAGTGCCACCAACATGGCGTGCACGGACTAGCCCCCACAGTC GGCTCGGGAGGACACCCAAG
Downstream 100 bases:
>100_bases GTAATCTCGACGAGCACGTCGGGCAAATCCTCTAACCGCTCCGGTCCGACCACTATCTCACACCCGGCGTGTAGTGATAC CTCGAAGATCGTGACACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGRFERNLAAMFTEYALISTLQALFWIVLPRTLGPQQFGKLVLLINLAGFLSDPIHQAVAFACSPELLGLGDRERASLCV SAVIVSLMLSFAVASAMLLAITFLPVPEKLRIVSDPWVASGLLVLCMSPVTKVVEPFLLAAGRNVFVVAIALGHAAKVVI PPLLRTSWVGAAICTGLCPLLAGLATLPLVGRPRGWNFAIGYLTRGMVIVVDRLVELGSYAYAVLLTYLLYGSKTSAFVG LGLAAYKFAALTLEAFVPPITLEVGAGEEEQAFRGLRRYLVPASIATAVAIVSCADLAPVVLSTEYGPAVPIVRWFSLPT LLLPYHIALRAYLIGSRRLRLLLVYRTLYASSFFVILHTLTGAFGPVSVPLGLLAALSSAPPMVAMIRRHTVTE
Sequences:
>Translated_394_residues MGRFERNLAAMFTEYALISTLQALFWIVLPRTLGPQQFGKLVLLINLAGFLSDPIHQAVAFACSPELLGLGDRERASLCV SAVIVSLMLSFAVASAMLLAITFLPVPEKLRIVSDPWVASGLLVLCMSPVTKVVEPFLLAAGRNVFVVAIALGHAAKVVI PPLLRTSWVGAAICTGLCPLLAGLATLPLVGRPRGWNFAIGYLTRGMVIVVDRLVELGSYAYAVLLTYLLYGSKTSAFVG LGLAAYKFAALTLEAFVPPITLEVGAGEEEQAFRGLRRYLVPASIATAVAIVSCADLAPVVLSTEYGPAVPIVRWFSLPT LLLPYHIALRAYLIGSRRLRLLLVYRTLYASSFFVILHTLTGAFGPVSVPLGLLAALSSAPPMVAMIRRHTVTE >Mature_393_residues GRFERNLAAMFTEYALISTLQALFWIVLPRTLGPQQFGKLVLLINLAGFLSDPIHQAVAFACSPELLGLGDRERASLCVS AVIVSLMLSFAVASAMLLAITFLPVPEKLRIVSDPWVASGLLVLCMSPVTKVVEPFLLAAGRNVFVVAIALGHAAKVVIP PLLRTSWVGAAICTGLCPLLAGLATLPLVGRPRGWNFAIGYLTRGMVIVVDRLVELGSYAYAVLLTYLLYGSKTSAFVGL GLAAYKFAALTLEAFVPPITLEVGAGEEEQAFRGLRRYLVPASIATAVAIVSCADLAPVVLSTEYGPAVPIVRWFSLPTL LLPYHIALRAYLIGSRRLRLLLVYRTLYASSFFVILHTLTGAFGPVSVPLGLLAALSSAPPMVAMIRRHTVTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42232; Mature: 42101
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFERNLAAMFTEYALISTLQALFWIVLPRTLGPQQFGKLVLLINLAGFLSDPIHQAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FACSPELLGLGDRERASLCVSAVIVSLMLSFAVASAMLLAITFLPVPEKLRIVSDPWVAS HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCHHHH GLLVLCMSPVTKVVEPFLLAAGRNVFVVAIALGHAAKVVIPPLLRTSWVGAAICTGLCPL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGLATLPLVGRPRGWNFAIGYLTRGMVIVVDRLVELGSYAYAVLLTYLLYGSKTSAFVG HHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LGLAAYKFAALTLEAFVPPITLEVGAGEEEQAFRGLRRYLVPASIATAVAIVSCADLAPV HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VLSTEYGPAVPIVRWFSLPTLLLPYHIALRAYLIGSRRLRLLLVYRTLYASSFFVILHTL HEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TGAFGPVSVPLGLLAALSSAPPMVAMIRRHTVTE HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure GRFERNLAAMFTEYALISTLQALFWIVLPRTLGPQQFGKLVLLINLAGFLSDPIHQAVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FACSPELLGLGDRERASLCVSAVIVSLMLSFAVASAMLLAITFLPVPEKLRIVSDPWVAS HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCHHHH GLLVLCMSPVTKVVEPFLLAAGRNVFVVAIALGHAAKVVIPPLLRTSWVGAAICTGLCPL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGLATLPLVGRPRGWNFAIGYLTRGMVIVVDRLVELGSYAYAVLLTYLLYGSKTSAFVG HHHHHHCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LGLAAYKFAALTLEAFVPPITLEVGAGEEEQAFRGLRRYLVPASIATAVAIVSCADLAPV HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VLSTEYGPAVPIVRWFSLPTLLLPYHIALRAYLIGSRRLRLLLVYRTLYASSFFVILHTL HEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TGAFGPVSVPLGLLAALSSAPPMVAMIRRHTVTE HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA