| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093679
Identifier: 20093679
GI number: 20093679
Start: 227527
End: 227967
Strand: Direct
Name: 20093679
Synonym: MK0239
Alternate gene names: NA
Gene position: 227527-227967 (Clockwise)
Preceding gene: 20093678
Following gene: 20093682
Centisome position: 13.42
GC content: 65.31
Gene sequence:
>441_bases GTGACCCGCTCCTACCTGGTGTTCGACGTGGGGAGGTACCGAGAGCTGGCTGAGGAGCTCGTGAAGCCGGAGGACATCGT GGTGGAGGTCGGCGCCGCCGCGGGTGATACCACCGTCAGACTGGCCCGCAACGCCCGGCTGGTGATCGCCTTCGAGAAGT CGGAGGAGATGTTCGAACGGCTGAGGGAACGCGTGCGCGACCTGGACAACGTGATCGTCCTGTGCGAGGACGGGTTCGAG CTGGGGGAAGTGCTCAAACGTACGGAGCGCGTGGACGCTGTCTTCATCGACGTAGGGGGTGGGGCGCAGCCGAGGTTGGC ACTGGCGCTGTGGGAGGCTTACTACTCGCGCTTCCGTCCGAGGGTGATCGTGGTCCGGAACCGGAGGCTCTGCCGGCTGA TCGAGACCGTGGAACGCGTGGAGTGCGATGAGGAGGTATAG
Upstream 100 bases:
>100_bases GAACCCCTCACACCGTGGCCCGTTCGGTACAGTTACGGACCAAGAGGCTAACCGGGCGACAGAAGCTTAACCGGCAGGAC GGAGGACGTCGGGGGCCGAC
Downstream 100 bases:
>100_bases CCGCCTCTGACGCGGTGATGAGGGCACTCGGGGCCGAGCACGCGCTCCGCGATGAGGAGGTGACCCCACTGACGGCTCGC ACGTCGATCGGAGGATGAAA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTRSYLVFDVGRYRELAEELVKPEDIVVEVGAAAGDTTVRLARNARLVIAFEKSEEMFERLRERVRDLDNVIVLCEDGFE LGEVLKRTERVDAVFIDVGGGAQPRLALALWEAYYSRFRPRVIVVRNRRLCRLIETVERVECDEEV
Sequences:
>Translated_146_residues MTRSYLVFDVGRYRELAEELVKPEDIVVEVGAAAGDTTVRLARNARLVIAFEKSEEMFERLRERVRDLDNVIVLCEDGFE LGEVLKRTERVDAVFIDVGGGAQPRLALALWEAYYSRFRPRVIVVRNRRLCRLIETVERVECDEEV >Mature_145_residues TRSYLVFDVGRYRELAEELVKPEDIVVEVGAAAGDTTVRLARNARLVIAFEKSEEMFERLRERVRDLDNVIVLCEDGFEL GEVLKRTERVDAVFIDVGGGAQPRLALALWEAYYSRFRPRVIVVRNRRLCRLIETVERVECDEEV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16891; Mature: 16759
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSYLVFDVGRYRELAEELVKPEDIVVEVGAAAGDTTVRLARNARLVIAFEKSEEMFER CCCCEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCEEEEEECCCHHHHHH LRERVRDLDNVIVLCEDGFELGEVLKRTERVDAVFIDVGGGAQPRLALALWEAYYSRFRP HHHHHHHHHCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC RVIVVRNRRLCRLIETVERVECDEEV EEEEECCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TRSYLVFDVGRYRELAEELVKPEDIVVEVGAAAGDTTVRLARNARLVIAFEKSEEMFER CCCEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCEEEEEECCCHHHHHH LRERVRDLDNVIVLCEDGFELGEVLKRTERVDAVFIDVGGGAQPRLALALWEAYYSRFRP HHHHHHHHHCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC RVIVVRNRRLCRLIETVERVECDEEV EEEEECCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA