Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093582

Identifier: 20093582

GI number: 20093582

Start: 141415

End: 141891

Strand: Direct

Name: 20093582

Synonym: MK0142

Alternate gene names: NA

Gene position: 141415-141891 (Clockwise)

Preceding gene: 20093580

Following gene: 20093584

Centisome position: 8.34

GC content: 58.49

Gene sequence:

>477_bases
GTGCCTCGGAAGATCTTGGTGCCGTTCGACGGGTCCGAACCCGCCGAGCTGGCCTTGAAGTGGGCGCTTCTGGACGCGCA
CGACCACGGATTTCCGATCAAAGTGATGTACGTGGTCGACCGCTCCTTGGACCTGCTCACGGGCTTCGCCCCCAGGGAGA
CCGTGCTGAAGGAGCTGAAGGAGAGAGGGGAGAAGATTCTGGAGGAAGCTGAGCAAATAGCCGGTGAACTAGGTGTCGAC
GTGAAGATTGAGAAGAAGGTCTGTGTAGGCATCCCGTGGCGTGAAATCGTGAGGGAAGCGGAAGATGACGAGGAGATCAA
CCTAATCGTGATGGGGTCTCACGGACGAACCGGTCCAGAACACGCGATCCTCGGAAGCGTCGCGGAGAACGTGATCAGAC
ACAGTCCCGTCAACGTCTTAGTGGTGAAGCGTGAGAAGAGGGTCGAGGATAGCGTTGAGGAGTCTTCCCGCCGCTAG

Upstream 100 bases:

>100_bases
CCGCGAGTGCCGTCAGCCCGGGCAAACGCGTTGCCCTGCTCTCCTCTAATTTCAAAAGTTTTTTAATGTTTCGAGATTAG
TTGAATAAAGGGATGCCATC

Downstream 100 bases:

>100_bases
ACCAAGCGCAGGCCGCTGAGCACCATCTTAGCCCCTACGAGGGCTAATACCACTGAAAACGCCCGCTTGACTCTCTCACC
GCCGATCTTGTTGGAGAGCT

Product: nucleotide-binding protein related to universal stress protein UspA

Products: NA

Alternate protein names: USP MJ0577 [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPRKILVPFDGSEPAELALKWALLDAHDHGFPIKVMYVVDRSLDLLTGFAPRETVLKELKERGEKILEEAEQIAGELGVD
VKIEKKVCVGIPWREIVREAEDDEEINLIVMGSHGRTGPEHAILGSVAENVIRHSPVNVLVVKREKRVEDSVEESSRR

Sequences:

>Translated_158_residues
MPRKILVPFDGSEPAELALKWALLDAHDHGFPIKVMYVVDRSLDLLTGFAPRETVLKELKERGEKILEEAEQIAGELGVD
VKIEKKVCVGIPWREIVREAEDDEEINLIVMGSHGRTGPEHAILGSVAENVIRHSPVNVLVVKREKRVEDSVEESSRR
>Mature_157_residues
PRKILVPFDGSEPAELALKWALLDAHDHGFPIKVMYVVDRSLDLLTGFAPRETVLKELKERGEKILEEAEQIAGELGVDV
KIEKKVCVGIPWREIVREAEDDEEINLIVMGSHGRTGPEHAILGSVAENVIRHSPVNVLVVKREKRVEDSVEESSRR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17750; Mature: 17618

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKILVPFDGSEPAELALKWALLDAHDHGFPIKVMYVVDRSLDLLTGFAPRETVLKELK
CCCEEEEECCCCCHHHHEEEHEEEECCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHH
ERGEKILEEAEQIAGELGVDVKIEKKVCVGIPWREIVREAEDDEEINLIVMGSHGRTGPE
HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCH
HAILGSVAENVIRHSPVNVLVVKREKRVEDSVEESSRR
HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRKILVPFDGSEPAELALKWALLDAHDHGFPIKVMYVVDRSLDLLTGFAPRETVLKELK
CCEEEEECCCCCHHHHEEEHEEEECCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHH
ERGEKILEEAEQIAGELGVDVKIEKKVCVGIPWREIVREAEDDEEINLIVMGSHGRTGPE
HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCH
HAILGSVAENVIRHSPVNVLVVKREKRVEDSVEESSRR
HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9860944 [H]