| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093580
Identifier: 20093580
GI number: 20093580
Start: 139843
End: 140517
Strand: Direct
Name: 20093580
Synonym: MK0140
Alternate gene names: NA
Gene position: 139843-140517 (Clockwise)
Preceding gene: 20093579
Following gene: 20093582
Centisome position: 8.25
GC content: 60.0
Gene sequence:
>675_bases ATGCGCGTGCTGTTCCTGGGCTACCGATACGGGAGTAGGGCCGCGGAAAACGTAGGGTCGAGGTCGGACTTCGACGTTGA GTTCCTCAAGGTGAAAGAACCCCCGGAGAACGTTATCCTGGATGAAGAGTACGCGAGGACCCTCTTGCCACCGTCCTACT CCGGGTTCGATCTCGTCATTTCGTACCTCCAGCACCCGGACCTACAACTCGCGCTGGCCGAAGTTTGTGATTCCCCTATA CTGTACGGTATCACCCCTGACCCGGCGGTTCGAGAGAAGATAGAGCGCAGTCACGACGCCGTCGCTTTCCCCGAGACCAC TATGTGTTCCCTGTTGCCTGATACCGGTATCCCAGAGGTCGACCGATTCGCCGAGAGGTTCGGGAGACCGAAACTGGAGG TGTCGGTGTCCGGAGGAAAGATCCGGACTGTACGGGTCGTCCGAGGCGCTCCGTGCGGTGCCACTTGGGTAGCCGCCGAG CGTGTGGAAGGGATGTCGGTGGACGAAGAGGCCGTGAACGCCTTCGCTCTGGCGGCCTGTCATCACTGCGTCGCACCACG CTTCGGTAAATTCGAATCGAAGGACGTCACGGCGTACCTGCACGGAGTCGCCTTGGCCGAAGCACTCGGGATCGAACTCG ATGTGGACCTAGAGGGGTTCGAGCTCCCCATTTAA
Upstream 100 bases:
>100_bases AGAGGAGACCGCGGGCTGAGCTGGCCGGCCGGAAGATTGAAAGATTCTTGAATAATTCAAATTTCTTTATAGGGCAACAA CGGATGAGGAGGGCACCACG
Downstream 100 bases:
>100_bases CCGCTGTTGTTTGTTGTTTAAAGTTAAAGTTTAGAGAAGCTTGATGCCCAACCCCTGTAGGATGAACTTCAACGATATGT ACAGGAACACCACTCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRVLFLGYRYGSRAAENVGSRSDFDVEFLKVKEPPENVILDEEYARTLLPPSYSGFDLVISYLQHPDLQLALAEVCDSPI LYGITPDPAVREKIERSHDAVAFPETTMCSLLPDTGIPEVDRFAERFGRPKLEVSVSGGKIRTVRVVRGAPCGATWVAAE RVEGMSVDEEAVNAFALAACHHCVAPRFGKFESKDVTAYLHGVALAEALGIELDVDLEGFELPI
Sequences:
>Translated_224_residues MRVLFLGYRYGSRAAENVGSRSDFDVEFLKVKEPPENVILDEEYARTLLPPSYSGFDLVISYLQHPDLQLALAEVCDSPI LYGITPDPAVREKIERSHDAVAFPETTMCSLLPDTGIPEVDRFAERFGRPKLEVSVSGGKIRTVRVVRGAPCGATWVAAE RVEGMSVDEEAVNAFALAACHHCVAPRFGKFESKDVTAYLHGVALAEALGIELDVDLEGFELPI >Mature_224_residues MRVLFLGYRYGSRAAENVGSRSDFDVEFLKVKEPPENVILDEEYARTLLPPSYSGFDLVISYLQHPDLQLALAEVCDSPI LYGITPDPAVREKIERSHDAVAFPETTMCSLLPDTGIPEVDRFAERFGRPKLEVSVSGGKIRTVRVVRGAPCGATWVAAE RVEGMSVDEEAVNAFALAACHHCVAPRFGKFESKDVTAYLHGVALAEALGIELDVDLEGFELPI
Specific function: Unknown
COG id: COG1810
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24584; Mature: 24584
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLFLGYRYGSRAAENVGSRSDFDVEFLKVKEPPENVILDEEYARTLLPPSYSGFDLVI CEEEEEEECCCCHHHHHCCCCCCCCEEEEEECCCCCCCEECHHHHHHHCCCCCCCHHHHH SYLQHPDLQLALAEVCDSPILYGITPDPAVREKIERSHDAVAFPETTMCSLLPDTGIPEV HHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHH DRFAERFGRPKLEVSVSGGKIRTVRVVRGAPCGATWVAAERVEGMSVDEEAVNAFALAAC HHHHHHHCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH HHCVAPRFGKFESKDVTAYLHGVALAEALGIELDVDLEGFELPI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCC >Mature Secondary Structure MRVLFLGYRYGSRAAENVGSRSDFDVEFLKVKEPPENVILDEEYARTLLPPSYSGFDLVI CEEEEEEECCCCHHHHHCCCCCCCCEEEEEECCCCCCCEECHHHHHHHCCCCCCCHHHHH SYLQHPDLQLALAEVCDSPILYGITPDPAVREKIERSHDAVAFPETTMCSLLPDTGIPEV HHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHH DRFAERFGRPKLEVSVSGGKIRTVRVVRGAPCGATWVAAERVEGMSVDEEAVNAFALAAC HHHHHHHCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH HHCVAPRFGKFESKDVTAYLHGVALAEALGIELDVDLEGFELPI HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA