| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093555
Identifier: 20093555
GI number: 20093555
Start: 110027
End: 111160
Strand: Direct
Name: 20093555
Synonym: MK0115
Alternate gene names: NA
Gene position: 110027-111160 (Clockwise)
Preceding gene: 20093552
Following gene: 20093563
Centisome position: 6.49
GC content: 60.41
Gene sequence:
>1134_bases ATGACGGATATAGTGTACGATGTGGAAGGGTTCCGAGCTTTTCTCCCGAAAGAAACACTTCGATGGATCCGACACAGGGA GCTCGAGCGTAAGGTAGGTGTAGTGGAGAAATTTTCGGACCGGGTCGGACCTATCCCGGTGGAGATTCGCCGCAGAAGGT CCCAATATGGCGAGTTCTATCACGCCGGAAAGGGGACTACTCGGATCCAAGCCCGCGTCTCCGCCGCGATGGAGTGCGTG GAACGCGCCGCCGCGGAGCCCCGCGAGGAGATCATCGAGCGGGGTCCGGAAGGTGACAAGTGGACACCGGCATGGTATCG GACGGAACCTAGGGAGTGGGTCGAGGGCGTGGATTTGACGACCCGCGAACCCGTCTACGTACCGGCGAACGAGGTGTTCC ATCCCTGGTTAGGTGACGCTCTGCCCAGTCATACCAACGGACTTTCGGCCGGCCGTCTCCGGGAAGAGGCCGTGATTCAA GGACTGCTAGAGGTCGTAGAGAGGGACTCATGGAGCATCGTCGAATACTTCAGGATCCACCCACCCGAATTGGAAGTACA CGGTGAGTTGGAGGAACTCCGCCGATCGTTAGAGCGGGAGGTCGGTCGAGTAGAGCTCAGGCTGCTGCCCTCCCGAGTCG AAGGCGTTTACGTGGTAGGAGCCGTCACCGAGGCCGAGCGCGTCGAGGAGATGGTGATGGGATTCGGCGCGAGTCCCGAC CCGGAGATGGCCGTCCTCCGAGCCTTGCTGGAGGTCGCCCAAGGGCTCTCGATGGCCCGTCGTGGCATCGAAAGCCCCGT GAGAAAGGGGCTCGGTGAGTTTTCGGCCCCGGGGAAGCTGACCCCGGAACGTCTCAAGAGATTGAACCGACACTGGTTCG AGCCCGAAGGGACCGTAGAGATAGATGACTTGGACCGTGTCATTACGACCGGTTCGTTGGAGAAGTTGACAGAAGAACTC GTGGAGAGAGTCGCGGAGGCTGGCCTCGGTAAGGTGATCGAGGTGGACTTAACGCTGGAAAACTTGGACGTTCCCGTGGT GAGGGTGCGAGTGACCGGCGCCTCGGAGTACGTGATAGACGAAGCGAGGGTGGGAAATATGCCGGAGAAGCCGCCCGGAG TGCCTATGGGATGA
Upstream 100 bases:
>100_bases GAGCATGGCCCGACCTTCGGCTAGGAACTCCTCATCCCCTGTCGCCACCGCGTACTCGTATATGTACACTCGCATTGCAG CACCACCCGGGGACCTCCGA
Downstream 100 bases:
>100_bases GGAAAAGAGGCCCGCGGAGCCCCGCGATGACGAGTGTCACCCTCGCCGACCTCGAAACGAGCTCAGAACAGGTCGTGTAA GTGGATCTCGTACTGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECV ERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQ GLLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEEL VERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG
Sequences:
>Translated_377_residues MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECV ERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQ GLLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEEL VERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG >Mature_376_residues TDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECVE RAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQG LLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPDP EMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEELV ERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG
Specific function: Unknown
COG id: COG1944
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0142 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017667 - InterPro: IPR003776 [H]
Pfam domain/function: PF02624 YcaO [H]
EC number: NA
Molecular weight: Translated: 42622; Mature: 42491
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFY CCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE HAGKGTTRIQARVSAAMECVERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLT ECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC TREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQGLLEVVERDSWSIVEYFRIH CCCCEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC PPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD CCCCEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEE IDDLDRVITTGSLEKLTEELVERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVID CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHH EARVGNMPEKPPGVPMG HHHCCCCCCCCCCCCCC >Mature Secondary Structure TDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFY CCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE HAGKGTTRIQARVSAAMECVERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLT ECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC TREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQGLLEVVERDSWSIVEYFRIH CCCCEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC PPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD CCCCEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEE IDDLDRVITTGSLEKLTEELVERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVID CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHH EARVGNMPEKPPGVPMG HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]