Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093555

Identifier: 20093555

GI number: 20093555

Start: 110027

End: 111160

Strand: Direct

Name: 20093555

Synonym: MK0115

Alternate gene names: NA

Gene position: 110027-111160 (Clockwise)

Preceding gene: 20093552

Following gene: 20093563

Centisome position: 6.49

GC content: 60.41

Gene sequence:

>1134_bases
ATGACGGATATAGTGTACGATGTGGAAGGGTTCCGAGCTTTTCTCCCGAAAGAAACACTTCGATGGATCCGACACAGGGA
GCTCGAGCGTAAGGTAGGTGTAGTGGAGAAATTTTCGGACCGGGTCGGACCTATCCCGGTGGAGATTCGCCGCAGAAGGT
CCCAATATGGCGAGTTCTATCACGCCGGAAAGGGGACTACTCGGATCCAAGCCCGCGTCTCCGCCGCGATGGAGTGCGTG
GAACGCGCCGCCGCGGAGCCCCGCGAGGAGATCATCGAGCGGGGTCCGGAAGGTGACAAGTGGACACCGGCATGGTATCG
GACGGAACCTAGGGAGTGGGTCGAGGGCGTGGATTTGACGACCCGCGAACCCGTCTACGTACCGGCGAACGAGGTGTTCC
ATCCCTGGTTAGGTGACGCTCTGCCCAGTCATACCAACGGACTTTCGGCCGGCCGTCTCCGGGAAGAGGCCGTGATTCAA
GGACTGCTAGAGGTCGTAGAGAGGGACTCATGGAGCATCGTCGAATACTTCAGGATCCACCCACCCGAATTGGAAGTACA
CGGTGAGTTGGAGGAACTCCGCCGATCGTTAGAGCGGGAGGTCGGTCGAGTAGAGCTCAGGCTGCTGCCCTCCCGAGTCG
AAGGCGTTTACGTGGTAGGAGCCGTCACCGAGGCCGAGCGCGTCGAGGAGATGGTGATGGGATTCGGCGCGAGTCCCGAC
CCGGAGATGGCCGTCCTCCGAGCCTTGCTGGAGGTCGCCCAAGGGCTCTCGATGGCCCGTCGTGGCATCGAAAGCCCCGT
GAGAAAGGGGCTCGGTGAGTTTTCGGCCCCGGGGAAGCTGACCCCGGAACGTCTCAAGAGATTGAACCGACACTGGTTCG
AGCCCGAAGGGACCGTAGAGATAGATGACTTGGACCGTGTCATTACGACCGGTTCGTTGGAGAAGTTGACAGAAGAACTC
GTGGAGAGAGTCGCGGAGGCTGGCCTCGGTAAGGTGATCGAGGTGGACTTAACGCTGGAAAACTTGGACGTTCCCGTGGT
GAGGGTGCGAGTGACCGGCGCCTCGGAGTACGTGATAGACGAAGCGAGGGTGGGAAATATGCCGGAGAAGCCGCCCGGAG
TGCCTATGGGATGA

Upstream 100 bases:

>100_bases
GAGCATGGCCCGACCTTCGGCTAGGAACTCCTCATCCCCTGTCGCCACCGCGTACTCGTATATGTACACTCGCATTGCAG
CACCACCCGGGGACCTCCGA

Downstream 100 bases:

>100_bases
GGAAAAGAGGCCCGCGGAGCCCCGCGATGACGAGTGTCACCCTCGCCGACCTCGAAACGAGCTCAGAACAGGTCGTGTAA
GTGGATCTCGTACTGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECV
ERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQ
GLLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD
PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEEL
VERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG

Sequences:

>Translated_377_residues
MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECV
ERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQ
GLLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD
PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEEL
VERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG
>Mature_376_residues
TDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFYHAGKGTTRIQARVSAAMECVE
RAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLTTREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQG
LLEVVERDSWSIVEYFRIHPPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPDP
EMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVEIDDLDRVITTGSLEKLTEELV
ERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVIDEARVGNMPEKPPGVPMG

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 42622; Mature: 42491

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFY
CCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE
HAGKGTTRIQARVSAAMECVERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLT
ECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC
TREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQGLLEVVERDSWSIVEYFRIH
CCCCEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
PPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD
CCCCEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC
PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEE
IDDLDRVITTGSLEKLTEELVERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVID
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHH
EARVGNMPEKPPGVPMG
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDIVYDVEGFRAFLPKETLRWIRHRELERKVGVVEKFSDRVGPIPVEIRRRRSQYGEFY
CCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE
HAGKGTTRIQARVSAAMECVERAAAEPREEIIERGPEGDKWTPAWYRTEPREWVEGVDLT
ECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCC
TREPVYVPANEVFHPWLGDALPSHTNGLSAGRLREEAVIQGLLEVVERDSWSIVEYFRIH
CCCCEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
PPELEVHGELEELRRSLEREVGRVELRLLPSRVEGVYVVGAVTEAERVEEMVMGFGASPD
CCCCEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCC
PEMAVLRALLEVAQGLSMARRGIESPVRKGLGEFSAPGKLTPERLKRLNRHWFEPEGTVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEE
IDDLDRVITTGSLEKLTEELVERVAEAGLGKVIEVDLTLENLDVPVVRVRVTGASEYVID
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHH
EARVGNMPEKPPGVPMG
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]