Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093563

Identifier: 20093563

GI number: 20093563

Start: 117235

End: 117816

Strand: Direct

Name: 20093563

Synonym: MK0123

Alternate gene names: NA

Gene position: 117235-117816 (Clockwise)

Preceding gene: 20093555

Following gene: 20093564

Centisome position: 6.92

GC content: 61.0

Gene sequence:

>582_bases
TTGGTCGAGGCGCGAGCACTGGCCGAGGCAGTGACCAAAGGTGTGCTCACGCACGTCGAGGTGAGCGTAAAGCCAGGCTC
CGGCCTGGTGCTGGATGTGGACGTTCCCAGAGCGGATCGGGTGAAAGACATCGTCAGATCACTCGTAACCCCGATCACGG
GCATGTATCAGGTCAGGGTCCGGATAACCAACGCGCGCGCCGAACCGGAAGCGGCGAATAAAAAGTGTCTCGCTACGGGG
ACGTTCACGGCCCTAGGGAAGGCGCTCATGGACGCGTTCTTCCCCGGTCGGGGTACCGAAGCCGTGAATAAGGCTCTCCT
CAGGGTGCCTATAACCTCCGAAGAAGCGTATCGCGGCAAGAGGTTCGATCGTGTGTACGATCCCCGCAAGAAGCGTTGGA
TTCCAGCTCGGCCCGGTATGATGTGTAGAACCAAAGACGGGATGATATGCGCGGTCACGGACGATCCCGACGGTATCGCG
CCCCCGGCCGCGGCCGAGAAGGACGCGAAGTTGGCCACGGTCCTGTGTGATACTCTGTTCGACATGCTCCTGGCTGAAAA
GCCACCCACGGTGCGGGGGTAA

Upstream 100 bases:

>100_bases
ATGGGGAGGCACTTCTTCAGCCACTCGTGATGCTTCTCCACCGCCCGCACGACGGAATGTACGTCCTCCAACCCGAACAC
CCCGAGGGAGGGTTTTGACT

Downstream 100 bases:

>100_bases
GCGGGAGTGAGGCCCGAGTCCGAGGGCGTCCGCCAAGCTGCGCGCCTGATGGCGGTAGCCGCCCGCACAGCTCCGAAAAC
GAGGGGTATCGACGACATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVEARALAEAVTKGVLTHVEVSVKPGSGLVLDVDVPRADRVKDIVRSLVTPITGMYQVRVRITNARAEPEAANKKCLATG
TFTALGKALMDAFFPGRGTEAVNKALLRVPITSEEAYRGKRFDRVYDPRKKRWIPARPGMMCRTKDGMICAVTDDPDGIA
PPAAAEKDAKLATVLCDTLFDMLLAEKPPTVRG

Sequences:

>Translated_193_residues
MVEARALAEAVTKGVLTHVEVSVKPGSGLVLDVDVPRADRVKDIVRSLVTPITGMYQVRVRITNARAEPEAANKKCLATG
TFTALGKALMDAFFPGRGTEAVNKALLRVPITSEEAYRGKRFDRVYDPRKKRWIPARPGMMCRTKDGMICAVTDDPDGIA
PPAAAEKDAKLATVLCDTLFDMLLAEKPPTVRG
>Mature_193_residues
MVEARALAEAVTKGVLTHVEVSVKPGSGLVLDVDVPRADRVKDIVRSLVTPITGMYQVRVRITNARAEPEAANKKCLATG
TFTALGKALMDAFFPGRGTEAVNKALLRVPITSEEAYRGKRFDRVYDPRKKRWIPARPGMMCRTKDGMICAVTDDPDGIA
PPAAAEKDAKLATVLCDTLFDMLLAEKPPTVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20936; Mature: 20936

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEARALAEAVTKGVLTHVEVSVKPGSGLVLDVDVPRADRVKDIVRSLVTPITGMYQVRV
CCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
RITNARAEPEAANKKCLATGTFTALGKALMDAFFPGRGTEAVNKALLRVPITSEEAYRGK
EEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCHHHHCCC
RFDRVYDPRKKRWIPARPGMMCRTKDGMICAVTDDPDGIAPPAAAEKDAKLATVLCDTLF
CCHHHCCCHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
DMLLAEKPPTVRG
HHHHHCCCCCCCC
>Mature Secondary Structure
MVEARALAEAVTKGVLTHVEVSVKPGSGLVLDVDVPRADRVKDIVRSLVTPITGMYQVRV
CCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
RITNARAEPEAANKKCLATGTFTALGKALMDAFFPGRGTEAVNKALLRVPITSEEAYRGK
EEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCHHHHCCC
RFDRVYDPRKKRWIPARPGMMCRTKDGMICAVTDDPDGIAPPAAAEKDAKLATVLCDTLF
CCHHHCCCHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
DMLLAEKPPTVRG
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA