Click here to switch to the map view.

The map label for this gene is RecJ

Identifier: 20093501

GI number: 20093501

Start: 58044

End: 59066

Strand: Reverse

Name: RecJ

Synonym: MK0061

Alternate gene names: NA

Gene position: 59066-58044 (Counterclockwise)

Preceding gene: 20093502

Following gene: 20093500

Centisome position: 3.48

GC content: 63.05

Gene sequence:

>1023_bases
TTGGACCCCACTAAGGAGGTAAGGAACGCGCTGGTCCCCCACCTGAAGAAACTGAAGGACGAGCGAGTCGCGGTAATTTC
GGATATCGACGTGGACGGGTTGGCGAGCGCCGCGATCCTCGGTCACGTGCTGAACAACGTCGGGGCGGACTTCGTGCTGT
ACTTCTCCCCTCCCGCTAACTTCGAGGAAGTCGTCTCCGGAATCGCTCCGGAGTGTGATGTGCTGATAGCCGCGGACCTA
GGGTCTACCGGGGAGACGGCGATTCACGACGCCAAGTCCGAGGGGTGTCGGGTGATCGTCGTAGACCATCACCAGGTACT
CGAGGACGTGCGACCCGACGTGTTCATCCACGACACCAGGCTCTGTGCGGCCGAGCTCTGCTATTGGGCCACGGTCGATC
TGCACGAGCGTGACCTACGACTCATCGCCGCATACGCAGCCTTCACAGACTACGCCGAGGAGTACTCCCGAGTACTCCGA
GAGACCCTCAAGATGTACGACCGGCGCAAGGTTTACACGGAGGCGAGCCTGCTCGACTACGCGCTGATCCGGATGGATGG
TGAAGACCGCCGGGAGTTGGCGCTCAAGCTCCCGGAGACTCCCGTCTCCGAGCTGGACGAAGTGTATGAGCTCGCTCGCG
ATGCTATGGCAGAGGAACACGAGGTGCTCCGTCGGGCGAGGGAGGTGGCGGAATGCCTGAACGAAGTCGTCGCGTACGCG
ATCATGGACGACGTCCACCCCGCGATGACCGGAAGGGTCGCATCCCACGTAGCGGGCGTGAAGCGAAGACCCGTGGGCGT
ATGCGTTCGACGGGGAAAGATCAGCGCCCGGGTAGTCGAGGGAGAGGAAATCGACGTAGCCCGAGCGATCAGAAAGGCGG
CGACCGAGGTGGGCGGAAAGGGCGGTGGACACGCACCGGCGGCCGGGGGCGTCGTCCCCGAAAGCAGGGTCGAGGAGTTC
CTGAGACTGTTCGGGGAGGAGGTGAAGAGACAGGTCGAAAGCGCCCGGACGAGGAAGTCGTGA

Upstream 100 bases:

>100_bases
CCTATCCCTGCGATGTACCCTCATCATCGGAGCAGGATCCGTCACGTAGATGCTGTGGTTCTAGTCTTTAAAAAGGTCGA
CTAACGGAAGGGGGTTTCCC

Downstream 100 bases:

>100_bases
GACGCTACGTGGAGCCCGGGAAGTTCGTACTGCCCGGCGACAAGATAACCGTGGCGGAGGCGTTCTACCCTGGCCCAGGT
ACCTACGAGGATGGTGGTGT

Product: single-stranded DNA-specific exonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPANFEEVVSGIAPECDVLIAADL
GSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTRLCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLR
ETLKMYDRRKVYTEASLLDYALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGKGGGHAPAAGGVVPESRVEEF
LRLFGEEVKRQVESARTRKS

Sequences:

>Translated_340_residues
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPANFEEVVSGIAPECDVLIAADL
GSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTRLCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLR
ETLKMYDRRKVYTEASLLDYALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGKGGGHAPAAGGVVPESRVEEF
LRLFGEEVKRQVESARTRKS
>Mature_340_residues
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPANFEEVVSGIAPECDVLIAADL
GSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTRLCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLR
ETLKMYDRRKVYTEASLLDYALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGKGGGHAPAAGGVVPESRVEEF
LRLFGEEVKRQVESARTRKS

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37580; Mature: 37580

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPAN
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
FEEVVSGIAPECDVLIAADLGSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTR
HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCHHHHHHCCCCEEEECHH
LCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLRETLKMYDRRKVYTEASLLDY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
GGGHAPAAGGVVPESRVEEFLRLFGEEVKRQVESARTRKS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPAN
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
FEEVVSGIAPECDVLIAADLGSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTR
HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCHHHHHHCCCCEEEECHH
LCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLRETLKMYDRRKVYTEASLLDY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
GGGHAPAAGGVVPESRVEEFLRLFGEEVKRQVESARTRKS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA