| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093480
Identifier: 20093480
GI number: 20093480
Start: 34081
End: 35229
Strand: Direct
Name: 20093480
Synonym: MK0040
Alternate gene names: NA
Gene position: 34081-35229 (Clockwise)
Preceding gene: 20093478
Following gene: 20093481
Centisome position: 2.01
GC content: 62.14
Gene sequence:
>1149_bases TTGGGAGGACTCTGCCCGAGATGCAGGGGCCGCGGATGGTGTGGGCGCGACCGCTGCCCCTTCTTGGACGCACTGAACGA GGTCCGAGCCAGGCTCTCGAGTCGGAACGTCGATGGTTACACCGTGACGGCCCACGTCTCGTGGCGTGGGTACCCGCGGG TTATCGCCGCGCCGGGAGTCGGAGAACACCGCACGCCGGATGAAGGGGGCGTCCTGGCCGACCTCCCGTACGAAGAGGCC CTGAAGACTAGAGCACTCACCTTCCGCAGATACCGTGGGAAGCGTGATGTCCGGAACCCGCCGGACCTGTCGGACCCCGA GATCGAGTCGTCGATTTCCGTGAGACCCGTGGAGAGTACGTTGCAGGTCCGACGGAGGCTTAGCGGCGCGTCCAGAACCA CCCCATTCATCGGGCCCTTGGTCGAGGGAGAGCTCGAACTCGACGGGACACCGAAGGTCCCTCGCGACTTGGAACGTTAT CACGAGGACGACGTCAAAGCTGAGGAGGCCGTCGTCGGCCTCTACCGACGCGGCTACGACGAGTCGTACATCGCGCGGGC GTTGTCGTTAGGATTGTTGGGCAGGGACCGCCGGATGGTGCCGACCCGATGGAGCGTCGCGGCGGTGGATTCGATGGTCT CCGAACACCTGGCACGGGAGGTCAGAGACTTACCGGTGTCTTCGGAGTACCGCGTTTTATCGGGTGAAGTGTTCGGTAAC GAGATGTGGGTGATTTTACGCCCAGAACCGTTGTCGTACGAGCTCGTCGAAGCTTACGAGCCAGGTGCGCCGTGGTCCGA TCGCACACGGATCGCTGTACTTAGGGACTCGGAAGTGAAGGATTGCAAGGAGCCCCGCGAAACCGGAGGTGCGTACTTCG CGGCCCGATTAGCGGCCCTAGAGTGGTGTTCCGAGCTGGGTAAACAGCACGGAATCACCGTGATCAGGATCGTTCGGAAG GAGTACTCGGCACCGTTGGGTGCGTGGGTGATCAGGGAAGCCGTACGACGCGCCGAAGAGGTGTTTTCAACGGACGATCC GCGCGAGGTGTGGGAGTTCCTGCGAGAGAAGTTGGACGATCCAGTGGGTGAAGCCGCTCTGAAGGTGATCAAACGTGGCC GCCAGAGAACTCTCGACACGTTTTTATGA
Upstream 100 bases:
>100_bases GAATACCCGTTGAGACTCTCTCCACGGCCATGGGACCGTCCCCCGTCGAACTCCCCTAAGGTCAATTCGATTATAATTCA TTGCGATCGGGGGTTGTCCT
Downstream 100 bases:
>100_bases GTAAGTAGGAGCCGAGCAATAGGGAGGAAGGCGATGCTACTGTTGAAGGACCACGCGGAAGTACTGCTTACGGTCGAGGA ACTCGGTACCAGGGAGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGGLCPRCRGRGWCGRDRCPFLDALNEVRARLSSRNVDGYTVTAHVSWRGYPRVIAAPGVGEHRTPDEGGVLADLPYEEA LKTRALTFRRYRGKRDVRNPPDLSDPEIESSISVRPVESTLQVRRRLSGASRTTPFIGPLVEGELELDGTPKVPRDLERY HEDDVKAEEAVVGLYRRGYDESYIARALSLGLLGRDRRMVPTRWSVAAVDSMVSEHLAREVRDLPVSSEYRVLSGEVFGN EMWVILRPEPLSYELVEAYEPGAPWSDRTRIAVLRDSEVKDCKEPRETGGAYFAARLAALEWCSELGKQHGITVIRIVRK EYSAPLGAWVIREAVRRAEEVFSTDDPREVWEFLREKLDDPVGEAALKVIKRGRQRTLDTFL
Sequences:
>Translated_382_residues MGGLCPRCRGRGWCGRDRCPFLDALNEVRARLSSRNVDGYTVTAHVSWRGYPRVIAAPGVGEHRTPDEGGVLADLPYEEA LKTRALTFRRYRGKRDVRNPPDLSDPEIESSISVRPVESTLQVRRRLSGASRTTPFIGPLVEGELELDGTPKVPRDLERY HEDDVKAEEAVVGLYRRGYDESYIARALSLGLLGRDRRMVPTRWSVAAVDSMVSEHLAREVRDLPVSSEYRVLSGEVFGN EMWVILRPEPLSYELVEAYEPGAPWSDRTRIAVLRDSEVKDCKEPRETGGAYFAARLAALEWCSELGKQHGITVIRIVRK EYSAPLGAWVIREAVRRAEEVFSTDDPREVWEFLREKLDDPVGEAALKVIKRGRQRTLDTFL >Mature_381_residues GGLCPRCRGRGWCGRDRCPFLDALNEVRARLSSRNVDGYTVTAHVSWRGYPRVIAAPGVGEHRTPDEGGVLADLPYEEAL KTRALTFRRYRGKRDVRNPPDLSDPEIESSISVRPVESTLQVRRRLSGASRTTPFIGPLVEGELELDGTPKVPRDLERYH EDDVKAEEAVVGLYRRGYDESYIARALSLGLLGRDRRMVPTRWSVAAVDSMVSEHLAREVRDLPVSSEYRVLSGEVFGNE MWVILRPEPLSYELVEAYEPGAPWSDRTRIAVLRDSEVKDCKEPRETGGAYFAARLAALEWCSELGKQHGITVIRIVRKE YSAPLGAWVIREAVRRAEEVFSTDDPREVWEFLREKLDDPVGEAALKVIKRGRQRTLDTFL
Specific function: Unknown
COG id: COG1602
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43248; Mature: 43116
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLCPRCRGRGWCGRDRCPFLDALNEVRARLSSRNVDGYTVTAHVSWRGYPRVIAAPGV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCC GEHRTPDEGGVLADLPYEEALKTRALTFRRYRGKRDVRNPPDLSDPEIESSISVRPVEST CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LQVRRRLSGASRTTPFIGPLVEGELELDGTPKVPRDLERYHEDDVKAEEAVVGLYRRGYD HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC ESYIARALSLGLLGRDRRMVPTRWSVAAVDSMVSEHLAREVRDLPVSSEYRVLSGEVFGN HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC EMWVILRPEPLSYELVEAYEPGAPWSDRTRIAVLRDSEVKDCKEPRETGGAYFAARLAAL EEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHH EWCSELGKQHGITVIRIVRKEYSAPLGAWVIREAVRRAEEVFSTDDPREVWEFLREKLDD HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC PVGEAALKVIKRGRQRTLDTFL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGLCPRCRGRGWCGRDRCPFLDALNEVRARLSSRNVDGYTVTAHVSWRGYPRVIAAPGV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCC GEHRTPDEGGVLADLPYEEALKTRALTFRRYRGKRDVRNPPDLSDPEIESSISVRPVEST CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LQVRRRLSGASRTTPFIGPLVEGELELDGTPKVPRDLERYHEDDVKAEEAVVGLYRRGYD HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC ESYIARALSLGLLGRDRRMVPTRWSVAAVDSMVSEHLAREVRDLPVSSEYRVLSGEVFGN HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC EMWVILRPEPLSYELVEAYEPGAPWSDRTRIAVLRDSEVKDCKEPRETGGAYFAARLAAL EEEEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHH EWCSELGKQHGITVIRIVRKEYSAPLGAWVIREAVRRAEEVFSTDDPREVWEFLREKLDD HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC PVGEAALKVIKRGRQRTLDTFL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA