Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20093474

Identifier: 20093474

GI number: 20093474

Start: 28904

End: 29251

Strand: Reverse

Name: 20093474

Synonym: MK0034

Alternate gene names: NA

Gene position: 29251-28904 (Counterclockwise)

Preceding gene: 20093475

Following gene: 20093473

Centisome position: 1.73

GC content: 51.15

Gene sequence:

>348_bases
ATGTTAGGGTTCTTGAAAAAGATCTTTGGCGAGGGGGAGAACTCGAAAGGCCCCATGCTTGAGGACTTCCTGGAGGAGGA
AGAGGAAGAGAGAACTCAGCACCCCAAAGTTACGATAATAGTATCTCGGGTTCAGGAGCCGTCGGATTTGGAGGAGTTGA
TGAATGAGCTTTACCAAGGGAACGTGCTGATACTGGATGTCAAACCCCTCCTCGATCGCGATGGTCATGAGGATATTATC
CAAGAACTCAAACGCACCGCGGTGAGCCTTGGTGGATTCGTCGGGGTTATTAAAGACACCGTGCTGCTGGTCACTTCCGA
TAGTGTTGACATCGAGAGGCGGGGCTGA

Upstream 100 bases:

>100_bases
CGGGAGAGCAAGTTCCAGTGAGGAACCCCGTCGAGGAATCCGAGAAGCTGGCACGGGACGTGCTCCGCACTATCGAGGGG
GCCGGTCGGGGCGGGGCACG

Downstream 100 bases:

>100_bases
TAAATGGCTAGATCCACGATCGTGCTGATCGGTGGCGCTTCGGGCGTTGGGACGTCCACGATCGCTCGTGAGGTCGCGAG
GAGACTCAATATTACACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLGFLKKIFGEGENSKGPMLEDFLEEEEEERTQHPKVTIIVSRVQEPSDLEELMNELYQGNVLILDVKPLLDRDGHEDII
QELKRTAVSLGGFVGVIKDTVLLVTSDSVDIERRG

Sequences:

>Translated_115_residues
MLGFLKKIFGEGENSKGPMLEDFLEEEEEERTQHPKVTIIVSRVQEPSDLEELMNELYQGNVLILDVKPLLDRDGHEDII
QELKRTAVSLGGFVGVIKDTVLLVTSDSVDIERRG
>Mature_115_residues
MLGFLKKIFGEGENSKGPMLEDFLEEEEEERTQHPKVTIIVSRVQEPSDLEELMNELYQGNVLILDVKPLLDRDGHEDII
QELKRTAVSLGGFVGVIKDTVLLVTSDSVDIERRG

Specific function: Unknown

COG id: COG2450

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12980; Mature: 12980

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFLKKIFGEGENSKGPMLEDFLEEEEEERTQHPKVTIIVSRVQEPSDLEELMNELYQG
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC
NVLILDVKPLLDRDGHEDIIQELKRTAVSLGGFVGVIKDTVLLVTSDSVDIERRG
CEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLGFLKKIFGEGENSKGPMLEDFLEEEEEERTQHPKVTIIVSRVQEPSDLEELMNELYQG
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC
NVLILDVKPLLDRDGHEDIIQELKRTAVSLGGFVGVIKDTVLLVTSDSVDIERRG
CEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA