| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093475
Identifier: 20093475
GI number: 20093475
Start: 29245
End: 30336
Strand: Reverse
Name: 20093475
Synonym: MK0035
Alternate gene names: NA
Gene position: 30336-29245 (Counterclockwise)
Preceding gene: 20093476
Following gene: 20093474
Centisome position: 1.79
GC content: 61.36
Gene sequence:
>1092_bases TTGACGGTGCTACGTTCGATCGATGAGCTTGCCGAGCTCAACCCGTTCGCCGTGGTAGGTGCCGGGGGCGGCGGGGAAAA GTTCGCGACACTTCCCACGGTCGAAGTCGTTGGGATTATGGACGACGACCCGAGTAAGGTGGGAATGGAGATCGCCGGAG TGAAAGTTACGAACGACTTCGATGAGGCCGTCGAAGGGGCGTCCTCCGTGGCGATTATGCTTCCGAAGGGTGCGGAACAC AGAGCCCTGGAGCTGGCCGTGGAATCCATCCGCCGCGGCCTCAATGTAGTTACGTCCTTCAGGTCACTTCCGCTCGAAGA CTATCCTGCGCTAGTGAAGCTGGCCGAGTCGAAAGGCGTCAAGATCCTCGAACTGAGCCCCAGGCTGGACGTCGTTCGTG AGGTAGCCGGGGACGCCCCAGAACGCTGCACTGAGGTGGTACCCAAGAAGGACAGGCCTGAGACGGAAATACCGCGCGTG TTCGTGGGTGGGACCTCTCAAGAGTGTGGTAAACGTACTACGACCCTCAAGTTAGCGGAAGGACTCGAGGCGTCAGGCTA TACCCCCGCGACGGTGGCCACGGGAGAGTTCGCAGCGCTCGAAGCGGACGTGGGGTTCCGGGCGGGTTCTCTCTCCGTCA TGGACGTAGCCTCCGCAGTAGCCCACGCCGTCGACTACGTCGCTGAGGAGAAAGACGCCGACGTGATCATTGTAGAGGGA CAGTCTTCACTCACCGAGCGTCGTAACCCGCATCCACGGCCCCTCTACTTAGGGATATTACTCGGGTGTGCTCCGGATGC GGTGGTGGTATGTCACCGTCCGAACCACCCGTTCCGGTACCCTCGTGGGGTTTTGGCCGAAGTCAATGCCCTCCGGGTTA TAGTCCCCGACGCGGACCTCGCGGCGGTGTGCGTGAACCCGAGAAACTTGGAGGAACCCTTCGAGACGTACGCTCGTAGA CTCCGTGCTAAGATATGGCGGGCTACGGGAGAGCAAGTTCCAGTGAGGAACCCCGTCGAGGAATCCGAGAAGCTGGCACG GGACGTGCTCCGCACTATCGAGGGGGCCGGTCGGGGCGGGGCACGATGTTAG
Upstream 100 bases:
>100_bases TTCGTGAGAAGCGACGAACGCTACGGGCCGCTCCGGGGTACCGGTAATACTATCAGCACTGGCCGGCGCGGATCGCGGTG AAGCCGGGGGGCGGCTACAG
Downstream 100 bases:
>100_bases GGTTCTTGAAAAAGATCTTTGGCGAGGGGGAGAACTCGAAAGGCCCCATGCTTGAGGACTTCCTGGAGGAGGAAGAGGAA GAGAGAACTCAGCACCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEH RALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRV FVGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARR LRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC
Sequences:
>Translated_363_residues MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEH RALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRV FVGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARR LRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC >Mature_362_residues TVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEHR ALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVF VGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEGQ SSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARRL RAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC
Specific function: Unknown
COG id: COG3367
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38920; Mature: 38789
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDF CCHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCHHCCEEEEEEEEECCH DEAVEGASSVAIMLPKGAEHRALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGV HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC KILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVFVGGTSQECGKRTTTLKLAE EEEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEHHC GLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG CCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADL CHHHHHCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCE AAVCVNPRNLEEPFETYARRLRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGG EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC ARC CCC >Mature Secondary Structure TVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDF CHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCHHCCEEEEEEEEECCH DEAVEGASSVAIMLPKGAEHRALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGV HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC KILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVFVGGTSQECGKRTTTLKLAE EEEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEHHC GLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG CCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADL CHHHHHCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCE AAVCVNPRNLEEPFETYARRLRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGG EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC ARC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA