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The map label for this gene is 20093472

Identifier: 20093472

GI number: 20093472

Start: 27295

End: 27900

Strand: Reverse

Name: 20093472

Synonym: MK0032

Alternate gene names: NA

Gene position: 27900-27295 (Counterclockwise)

Preceding gene: 20093473

Following gene: 20093471

Centisome position: 1.65

GC content: 56.77

Gene sequence:

>606_bases
ATGAAGTATAAAATGGAGTTATCCGACTTGGAGTGTCCAGTGTGTGGAGAAAAGGCACTGATGGTACACGGAAGAGTGGA
TGAGATACCACACTTCGGGCGAGTCCTCGAGCAGTTCATCCACTGTAAGGCGTGCGGGTATCGGCACTCCGATGTTATGT
GTTTGGAGGATCGGGAACCTGCGGAGTACCGGTACCGGGTTAACTCACCCGAGGATCTTCGCGTTCGAGTGGTTCGCTCA
CCTTCGGGTTTCGTTGAAATACCCGAGCTCGGGATCGAGGTCAAGCCAGGTCCCGCTGCTCAGGGTTTCGTGTCCAACAT
CGAGGGATTGCTGAGGAGGATCCGAGAACGCGTGGAAACAGCCGCCAAGTGGGCGGATAAAGAGGAGTCCAAGAAGCGGG
CGGAGGAAATCCTACGCAGGATGGACGCGGCGGTTTCAGGAGAGGACGAGATCACGATCGTGCTAAAGGATCCTTACGGT
CACTCGGCCATCGTTCCCGAGGAGGACGACAAGCTCGAGGTGCGGGAGTTGGACGAGGAGGAGGCCGAAGAGCTCCGCAG
CAGGATATTCCGCCCGCTGGTGCCCTCCGGGGAATATTCTAATTAG

Upstream 100 bases:

>100_bases
AAGCTTCGAGAGGAGGGATTTAAGGTAGAAGAGCTACGGCCGGGGGACGTGTGCGAGGTTGGGAAAGAAGATAGGGGAGG
ATAACCGCGAAACCCATGAA

Downstream 100 bases:

>100_bases
GACTCGAACCGACGGCGGCGTTGAGGGAGGGTCCAGGCCCGAAGTAGGAGGGTGAGAAGGACCATGAACCTACGGCCCCA
GCGTCGGATGGCGGCCGAGA

Product: C4-type Zn-finger-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKYKMELSDLECPVCGEKALMVHGRVDEIPHFGRVLEQFIHCKACGYRHSDVMCLEDREPAEYRYRVNSPEDLRVRVVRS
PSGFVEIPELGIEVKPGPAAQGFVSNIEGLLRRIRERVETAAKWADKEESKKRAEEILRRMDAAVSGEDEITIVLKDPYG
HSAIVPEEDDKLEVRELDEEEAEELRSRIFRPLVPSGEYSN

Sequences:

>Translated_201_residues
MKYKMELSDLECPVCGEKALMVHGRVDEIPHFGRVLEQFIHCKACGYRHSDVMCLEDREPAEYRYRVNSPEDLRVRVVRS
PSGFVEIPELGIEVKPGPAAQGFVSNIEGLLRRIRERVETAAKWADKEESKKRAEEILRRMDAAVSGEDEITIVLKDPYG
HSAIVPEEDDKLEVRELDEEEAEELRSRIFRPLVPSGEYSN
>Mature_201_residues
MKYKMELSDLECPVCGEKALMVHGRVDEIPHFGRVLEQFIHCKACGYRHSDVMCLEDREPAEYRYRVNSPEDLRVRVVRS
PSGFVEIPELGIEVKPGPAAQGFVSNIEGLLRRIRERVETAAKWADKEESKKRAEEILRRMDAAVSGEDEITIVLKDPYG
HSAIVPEEDDKLEVRELDEEEAEELRSRIFRPLVPSGEYSN

Specific function: Unknown

COG id: COG1779

COG function: function code R; C4-type Zn-finger protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZPR1 family [H]

Homologues:

Organism=Homo sapiens, GI4508021, Length=184, Percent_Identity=28.804347826087, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321650, Length=187, Percent_Identity=26.2032085561497, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18858239, Length=176, Percent_Identity=30.6818181818182, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004457
- InterPro:   IPR004470 [H]

Pfam domain/function: PF03367 zf-ZPR1 [H]

EC number: NA

Molecular weight: Translated: 23040; Mature: 23040

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKMELSDLECPVCGEKALMVHGRVDEIPHFGRVLEQFIHCKACGYRHSDVMCLEDREP
CCEECCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
AEYRYRVNSPEDLRVRVVRSPSGFVEIPELGIEVKPGPAAQGFVSNIEGLLRRIRERVET
CCEEEECCCCCCEEEEEEECCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AAKWADKEESKKRAEEILRRMDAAVSGEDEITIVLKDPYGHSAIVPEEDDKLEVRELDEE
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCHH
EAEELRSRIFRPLVPSGEYSN
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKYKMELSDLECPVCGEKALMVHGRVDEIPHFGRVLEQFIHCKACGYRHSDVMCLEDREP
CCEECCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
AEYRYRVNSPEDLRVRVVRSPSGFVEIPELGIEVKPGPAAQGFVSNIEGLLRRIRERVET
CCEEEECCCCCCEEEEEEECCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AAKWADKEESKKRAEEILRRMDAAVSGEDEITIVLKDPYGHSAIVPEEDDKLEVRELDEE
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCHH
EAEELRSRIFRPLVPSGEYSN
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]