Click here to switch to the map view.

The map label for this gene is rpl19e [H]

Identifier: 20093471

GI number: 20093471

Start: 26782

End: 27231

Strand: Reverse

Name: rpl19e [H]

Synonym: MK0031

Alternate gene names: 20093471

Gene position: 27231-26782 (Counterclockwise)

Preceding gene: 20093472

Following gene: 161485665

Centisome position: 1.61

GC content: 61.56

Gene sequence:

>450_bases
ATGAACCTACGGCCCCAGCGTCGGATGGCGGCCGAGATACTCAAGTGCGGTGTTCATAGGATATGGATAGATCCGGAGAG
GCTGGAAGAAGTCGCCCGAGCCCAGACCCGGGAGGATATCCGTCGGCTCATCAAGGAGGGGGCTATCCGGAAGAAGCCGA
TCAAGGGACAGTCCCGGGTGAGAGCCCGGAAGCGGCACGAACAGCGGAAGAAGGGGCGCCAGCGTGGTCCGGGTCGTCGG
AAGGGAGCGAAGGGTGCACGGATGCCGAAGAAGCGCGCGTGGATCCAGCGAATAAGGCCGATCAGGCGCAAGCTGCGGGA
GCTCCGAGACTCCGGCAAGATCGACCGCAGCACGTATCGGAAGCTGTACATGATGGCGAAGGGAGGATACTTCCGCGACA
CCTCGCACCTGTTGGCGTACATCGAGGAGAACGACCTGTGGAAGAAGTAA

Upstream 100 bases:

>100_bases
CCGCCCGCTGGTGCCCTCCGGGGAATATTCTAATTAGGACTCGAACCGACGGCGGCGTTGAGGGAGGGTCCAGGCCCGAA
GTAGGAGGGTGAGAAGGACC

Downstream 100 bases:

>100_bases
GGGGTGATTGCGTTGGCCACGGGTCCCAGGTATCGGGTTCCGTTCAGAAGGCGTCGCGAGGGTAAGACCAACTACTACAA
GCGACGTGAGTTAATCAAGG

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNLRPQRRMAAEILKCGVHRIWIDPERLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRVRARKRHEQRKKGRQRGPGRR
KGAKGARMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYRKLYMMAKGGYFRDTSHLLAYIEENDLWKK

Sequences:

>Translated_149_residues
MNLRPQRRMAAEILKCGVHRIWIDPERLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRVRARKRHEQRKKGRQRGPGRR
KGAKGARMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYRKLYMMAKGGYFRDTSHLLAYIEENDLWKK
>Mature_149_residues
MNLRPQRRMAAEILKCGVHRIWIDPERLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRVRARKRHEQRKKGRQRGPGRR
KGAKGARMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYRKLYMMAKGGYFRDTSHLLAYIEENDLWKK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=139, Percent_Identity=46.0431654676259, Blast_Score=117, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17508673, Length=140, Percent_Identity=47.1428571428571, Blast_Score=131, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319559, Length=140, Percent_Identity=40.7142857142857, Blast_Score=108, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6319444, Length=140, Percent_Identity=40.7142857142857, Blast_Score=108, Evalue=3e-25,
Organism=Drosophila melanogaster, GI45552831, Length=142, Percent_Identity=47.887323943662, Blast_Score=140, Evalue=2e-34,
Organism=Drosophila melanogaster, GI17136322, Length=142, Percent_Identity=47.887323943662, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17950; Mature: 17950

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPQRRMAAEILKCGVHRIWIDPERLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRV
CCCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
RARKRHEQRKKGRQRGPGRRKGAKGARMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLYMMAKGGYFRDTSHLLAYIEENDLWKK
HHHHHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLRPQRRMAAEILKCGVHRIWIDPERLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRV
CCCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
RARKRHEQRKKGRQRGPGRRKGAKGARMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLYMMAKGGYFRDTSHLLAYIEENDLWKK
HHHHHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]