| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093460
Identifier: 20093460
GI number: 20093460
Start: 19326
End: 19685
Strand: Direct
Name: 20093460
Synonym: MK0020
Alternate gene names: NA
Gene position: 19326-19685 (Clockwise)
Preceding gene: 20093459
Following gene: 20093477
Centisome position: 1.14
GC content: 59.72
Gene sequence:
>360_bases ATGCCGAAGTTGAACCAGCGAGGACTGGTCGAGTTACGGCGTGAGTTGGAGCGGCGGCTCGTAGAACTGCTGGGCAAACC GGTACACGTGATGCAGCTGACGATCTTCGCGCTACCGTGCGGATGTGTAGGTGCTTCTCTGGAGGTGCGCAACATCGTCC GGGAAGACGCTGAGGTCTTCAGGGACCACCTCCGAGACCTCCTACGAGAGATGGTGAAATGGACGCTGGGGAAGGAACCC GACCTGTACTACGCACGGCTGACTCCGTCCGGTTACGATGTAGTCAGTCTAACGGGCCGCGTAGCTTGCGACGAATGCGA GAAGAACTTCAAGGGAGCGGCCGACGTGCTCCCGCTCTGA
Upstream 100 bases:
>100_bases TTCCTAAAGCGGGTAGGTCGGTGTGATCGTCGGTGTTCGAAGTGCGGATTCTGTGCCGAGCTTGCTGAGCGGGCCGTAGA GCCGTTGGGCGGTCTAGAAG
Downstream 100 bases:
>100_bases CACGACGCCCTGGAAGCGTTATCGGGGTAACAGCGGCGGGTGTGCCCGGTCCAAAGGACGGGGCGGTCACCGTCCGGTCG GACGACCATCTCCGCCCCGC
Product: metal-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEP DLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL
Sequences:
>Translated_119_residues MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEP DLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL >Mature_118_residues PKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEPD LYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020380 - ProDom: PD076426 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13551; Mature: 13420
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVF CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RDHLRDLLREMVKWTLGKEPDLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVF CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RDHLRDLLREMVKWTLGKEPDLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]