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The map label for this gene is tdcF

Identifier: 19746941

GI number: 19746941

Start: 1771458

End: 1771838

Strand: Reverse

Name: tdcF

Synonym: spyM18_2121

Alternate gene names: NA

Gene position: 1771838-1771458 (Counterclockwise)

Preceding gene: 19746944

Following gene: 19746940

Centisome position: 93.5

GC content: 40.94

Gene sequence:

>381_bases
ATGAAAACAATTAGACGTTATGATGTTAACGAAGATAGAGGGCATACAGGCCTTGTAGAAGCAGGAGACTTCTATTATTT
AAACTATTGTGTCGGCAATGTTGGACAAGACATTGAAAGTCAGATTAATGGAGCCTTTGACGAGATGGAGCGCCGATTAG
CATTGGTGGGGCTCACATTAGATGCAGTTGTTCAAATGGATTGTCTATTTCGAGACGTTTGGAACATACCTGTGATGGAA
AAAATGATTAAAGAGCGCTTTAATGGCAGATACCCTGCTCGAAAATCGATTCAAACGGAATTTGCACATCACGGTGGACC
ACAAGGACTACTCTTTCAAGTGGATGGTGTGGCTTATTCAAAGCATATTTCGATGACCTAA

Upstream 100 bases:

>100_bases
TCTATCGTAAAAGAAGTCAACCAAAGGTTTTTAATATAAAATATTAAGAAAAATTGTTATAATTGTGATAAAAACATAAT
CGTAAAATAGAGGAAAAACA

Downstream 100 bases:

>100_bases
TCAAGGTTACTTTAAGATCATAGTGGTATAATAACGTTATGAGATTTCTAGAACTTTTACAAAAGAAATTTTTTCCTAAA
GCATATCAGGAAAAACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease L-PSP

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKTIRRYDVNEDRGHTGLVEAGDFYYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVME
KMIKERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGVAYSKHISMT

Sequences:

>Translated_126_residues
MKTIRRYDVNEDRGHTGLVEAGDFYYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVME
KMIKERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGVAYSKHISMT
>Mature_126_residues
MKTIRRYDVNEDRGHTGLVEAGDFYYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTLDAVVQMDCLFRDVWNIPVME
KMIKERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGVAYSKHISMT

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14406; Mature: 14406

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIRRYDVNEDRGHTGLVEAGDFYYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTL
CCCCCCCCCCCCCCCCCEEECCCEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
DAVVQMDCLFRDVWNIPVMEKMIKERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGVAYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCEEEC
KHISMT
CEECCC
>Mature Secondary Structure
MKTIRRYDVNEDRGHTGLVEAGDFYYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTL
CCCCCCCCCCCCCCCCCEEECCCEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
DAVVQMDCLFRDVWNIPVMEKMIKERFNGRYPARKSIQTEFAHHGGPQGLLFQVDGVAYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCEEEC
KHISMT
CEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA