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The map label for this gene is yyaQ [H]

Identifier: 19746498

GI number: 19746498

Start: 1295917

End: 1296996

Strand: Reverse

Name: yyaQ [H]

Synonym: spyM18_1568

Alternate gene names: 19746498

Gene position: 1296996-1295917 (Counterclockwise)

Preceding gene: 19746499

Following gene: 19746497

Centisome position: 68.44

GC content: 41.11

Gene sequence:

>1080_bases
ATGAATTTAGCAACTGACTATTTTAGCCGACAGACCCCCATAGTTGAAAAGCTAGTGGCTTACGGTTTTGAGAAGCGAGA
CAACGGTTATTTCTATAACGAACGGTTTATGGAAGGAGAATTTGAGGCGCAGCTTAGGATTGATGAGGCTGGCAATATCT
GGGATCGGGTTATTGATTGTGATTTGGAGGAGGATTATTTGCCTTTACAACAAGCAGCCTGGCAAGGAACCTATACTGGG
CAGGTTAGAGCAGCCTATTTGGAACTCTTGGAGCGCTTATCAGTAGCCTGTTTTGAAGTCACTCCTTTTCAGTCAATGCA
AGCTAATAGACTTGCTAAGCATATCACCAAAGAATGGTCTGACCCAATGGACTATCCTTTTGAAAAGCACCCAGACCTTG
CAACCTATCGGGTAGGGGGCAAATGGTATGCTATGATTTTTTCTCTCTTGGCTGATAAATTAGACCAGATACCAGAGAGA
TTAGTAGGACAGACATGTGAAGTGATGACTGTCAAAGTTAATCCCAAGGATTTCCCTCAGTTACTGCAGCAAGAAGGCAT
TTACCCAGCGTATCACATGTCAAAGAAAAACTGGATTAGTATTATTTTGGATGATAAGGTAACAGATGATAAGCTTTGGA
CGTTAGTGACTCAAAGTCGTCAACTAGTCAACCCAAACGGTCTTTCTAATCCTAATGGTCCTGATTATTGGGTCATTCCA
GCTAATTTGAAATACTATGATATTGATGCAGAATTTGCAGCCAATGATGTGATTTTATGGACCCAAAAAGCTGGTATTGC
CGTGGGAGACTACGTGCTGATTTATATGACAGCCCCAGTCAAATCCATTCGCTATGCCTGCCAAGTTCTAGAAACTGATA
TACCTAACGAGGGTTATCGTAAAAATCCTAACATTGACAAACTCATGCGTCTCCGAAAATGCCAACAGTACAAGGATGGT
CTCTTGTCTTTTGACCTTATGAAAAAATATGGCGTAGCTGCAGTGAGAGGGCCAAGACGATTAAGCCCTCAATTAATTGC
ATTTTTAAAGGAAAAAGAGTATCTTAAAGAAAACAACTAA

Upstream 100 bases:

>100_bases
GGCAGACGACACACAGGAAAACGAGTAAGGTTACAGGAAGTGCATGTCAGCCATTTCCCTAAGTTAGGGTATTGGAGATA
AGAACCTTAGAAAGGATATC

Downstream 100 bases:

>100_bases
GGGGACTAAAGGAGAATAAGAGATGGTTGAATTTGTAGCAGATCAAAGTTTTTGGGAACTTTTTCCAGATGCCAAACTAG
GTGTCGTCTTATTAAAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTG
QVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPER
LVGQTCEVMTVKVNPKDFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIP
ANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDG
LLSFDLMKKYGVAAVRGPRRLSPQLIAFLKEKEYLKENN

Sequences:

>Translated_359_residues
MNLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTG
QVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPER
LVGQTCEVMTVKVNPKDFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIP
ANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDG
LLSFDLMKKYGVAAVRGPRRLSPQLIAFLKEKEYLKENN
>Mature_359_residues
MNLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTG
QVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPER
LVGQTCEVMTVKVNPKDFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIP
ANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDG
LLSFDLMKKYGVAAVRGPRRLSPQLIAFLKEKEYLKENN

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 41644; Mature: 41644

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDC
CCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCEECCCEEEEEEECCCCCHHHHHHCC
DLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWS
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC
DPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDFPQ
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHH
LLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIP
HHHHCCCCCHHCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCEEEEEE
ANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYR
CCEEEEECCCCCCCCCEEEEECCCCCEECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCC
KNPNIDKLMRLRKCQQYKDGLLSFDLMKKYGVAAVRGPRRLSPQLIAFLKEKEYLKENN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDC
CCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCEECCCEEEEEEECCCCCHHHHHHCC
DLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWS
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC
DPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDFPQ
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHH
LLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIP
HHHHCCCCCHHCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCEEEEEE
ANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYR
CCEEEEECCCCCCCCCEEEEECCCCCEECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCC
KNPNIDKLMRLRKCQQYKDGLLSFDLMKKYGVAAVRGPRRLSPQLIAFLKEKEYLKENN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]