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The map label for this gene is 19746220

Identifier: 19746220

GI number: 19746220

Start: 1047573

End: 1047800

Strand: Reverse

Name: 19746220

Synonym: spyM18_1247

Alternate gene names: NA

Gene position: 1047800-1047573 (Counterclockwise)

Preceding gene: 19746221

Following gene: 19746219

Centisome position: 55.29

GC content: 39.04

Gene sequence:

>228_bases
ATGATCAATTTAAAATTACGACTACAAAACAAAGTAACTTTGATGGCTATTTTGGGAGCTATCTTTTTACTGGCACAGCA
ATTAGGTATTAAACTACCATCCAATATTGCGGATATTGCTAACACAGCTGTGACGCTTTTAGTATTGCTCGGTGTTGTCA
CAGATCCAACCACACAAGGCCTGTCAGACAGTGAGCAAGCATTGACTTACCACGAACCAAAACAATAG

Upstream 100 bases:

>100_bases
ACGCTGAGCAAAATAAAACGTTGATTACAATGACAGAGCAAATTAAAAATTTAACAGATGATGTTAAAGATTTAAAAGAT
ATGATGAGAGGAGAAATCAA

Downstream 100 bases:

>100_bases
GAGGGGACATGCGAGCAATCACACGATTAGCGTTAATACTAGCAATCGCAATACTGTATGTGCCGATGTCTGTGGTTGCT
CTTATCTTTTATCCGTTTTT

Product: holin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTQGLSDSEQALTYHEPKQ

Sequences:

>Translated_75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTQGLSDSEQALTYHEPKQ
>Mature_75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTQGLSDSEQALTYHEPKQ

Specific function: Unknown

COG id: COG5546

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8084; Mature: 8084

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTQG
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LSDSEQALTYHEPKQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTQG
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LSDSEQALTYHEPKQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA